[CIG-SHORT] Debugging symbols

[Brad Aagaard]

Birendra,

The pylith-installer configure just sets some basic parameters for 
calling configure for each of the dependencies. If you want to tweak the 
configure parameters for one or two packages, then I recommend you 
either configure them manually (check the config.log for that package to 
see what the pylith-installer did) or edit the pylith-installer Makefile.am.

We did not setup the pylith-installer to account for passing environment 
variables on the configure command line. I will look into whether this 
is a good option for fine tuning the build behavior.

Brad



On 03/12/2012 01:01 AM, Birendra jha wrote:
> Dear developers,
>
> How can I activate the Petsc and Pylith debugging symbols during the 1.6.3 install? I am following the instructions in INSTALL. Can I just change the configure command:
>
> $HOME/src/pylith/pylith-installer-1.6.3-0/configure --with-petsc_options="--with-debugging=1" --with-make-threads=2 --prefix=$HOME/pylith CXXFLAGS="-g -fPIC"
>
> Then:
>
> make
>
> Thanks and regards
> Birendra
>
> --- On Sun, 3/11/12, Matthew Knepley<knepley at mcs.anl.gov>  wrote:
>
> From: Matthew Knepley<knepley at mcs.anl.gov>
> Subject: Re: [CIG-SHORT] Pylith installer Petsc make error
> To: "Birendra jha"<bjha7333 at yahoo.com>
> Cc: cig-short at geodynamics.org, "Brad Aagaard"<baagaard at usgs.gov>
> Date: Sunday, March 11, 2012, 11:27 PM
>
> On Sun, Mar 11, 2012 at 12:06 PM, Birendra jha<bjha7333 at yahoo.com>  wrote:
>
> Hi
>
>
>
> I downloaded pylith-installer-1.6.3-0 and I am trying to install it following the directions in INSTALL. I ran make as per Step 4. I am getting following error:
>
> You do not have the libz compression library installed. PyLith requires it, so we get
>
> Executing: cc  -o /tmp/petsc-sm0ep7/config.setCompilers/conftest -L/home/bjha/pylith/lib   /tmp/petsc-sm0ep7/config.setCompilers/conftest.o -lzsh: Possible ERROR while running linker: /usr/bin/ld: cannot find -lz
> collect2: ld returned 1 exit status output: ret = 256
> Really it should check and give a better error message. We will fix that.
>     Matt
>
> *******************************************************************************
>
>           UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for details):
>
> -------------------------------------------------------------------------------
>
> Could not locate a functional C compiler
>
> *******************************************************************************
>
>
>
> make[3]: Entering directory `/home/bjha/build/pylith/petsc-dev'
>
> makefile:14: pylith_petsc_opt/conf/petscvariables: No such file or directory
>
> /home/bjha/build/pylith/petsc-dev/conf/variables:95: /home/bjha/build/pylith/petsc-dev/pylith_petsc_opt/conf/petscvariables: No such file or directory
>
> /home/bjha/build/pylith/petsc-dev/conf/rules:1061: /home/bjha/build/pylith/petsc-dev/pylith_petsc_opt/conf/petscrules: No such file or directory
>
> make[3]: *** No rule to make target `/home/bjha/build/pylith/petsc-dev/pylith_petsc_opt/conf/petscrules'.  Stop.
>
> make[3]: Leaving directory `/home/bjha/build/pylith/petsc-dev'
>
> make[2]: *** [petsc] Error 2
>
> make[2]: Leaving directory `/home/bjha/build/pylith'
>
> make[1]: *** [installed_petsc] Error 2
>
> make[1]: Leaving directory `/home/bjha/build/pylith'
>
> make: *** [installed_pylith] Error 2
>
>
>
> I have attached $HOME/build/pyliyh/petsc-dev/configure.log. Also attached is the $HOME/build/pyliyh/config.log file.
>
>
>
> Please help.
>
>
>
> thanks and regards
>
> Birendra
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