[CIG-SHORT] missing installation files v1.8

Brad Aagaard baagaard at usgs.gov
Thu Jun 4 09:29:49 PDT 2015


Birendra,

The configure line to nemesis is missing CC=mpicc CXX=mpicxx

This was added on Nov 30, 2012 
(https://github.com/geodynamics/pylith_installer/commit/3d75ee30dc708622244324b1a537f6e0a4db4b9b), 
which may have been a patch after the installer version you are using.

Note that we have a complete history of the commits for the installer 
via Git, but we only have a complete history of the installer tags going 
back to v1.9.0-2 when we started tagging things in Git.

There are a number of patches that have been made to the installer since 
v1.8.0 was released. A few of these fix problems while others are more 
cosmetic or update to new verions of dependencies.

If you encounter additional problems, I suggest you download the current 
installer and do a diff of the Makefile or peruse the commits of the 
installer Git repo and cherry pick the appropriate updates.

Regards,
Brad


On 06/04/2015 08:33 AM, Birendra jha wrote:
> Brad
>
> I am getting missing MPI library error:
>
> configure: downloading missing Python dependencies
> configure: building Python dependencies
> checking for egg-related flags... ok
> checking for library containing MPI_Init... no
> configure: error: MPI library not found
> make[3]: Entering directory `/galileo/home/usera06agi/a06agi25/build/pylith/nemesis-build'
>
> I have attached nemesis-build/config.log and build/pylith/config.log
>
> I have added openmpi in the path:
> [a06agi25 at node171 nemesis-build]$ which mpicc
> /developers/devenv/prod/opt/compilers/openmpi/1.6.4/gnu--4.7.2/bin/mpicc
>
> So I don't understand why it calls gcc instead of mpicc in the nemesis config.log:
>
> configure:4206: checking for library containing MPI_Init
> configure:4237: gcc -o conftest -g -O2 -I/galileo/home/usera06agi/a06agi25/pylith/include  -L/galileo/home/usera06agi/a06agi25/pylith/lib  conftest.c
>
> Thanks
> Birendra
> --------------------------------------------
> On Tue, 5/26/15, Brad Aagaard <baagaard at usgs.gov> wrote:
>
>   Subject: Re: [CIG-SHORT] missing installation files v1.8
>   To: cig-short at geodynamics.org
>   Date: Tuesday, May 26, 2015, 2:32 PM
>
>   Birendra,
>
>   It is looking for merlin,
>   which was not migrated over to the "new"
>   geodynamics website because it is no longer
>   needed by pythia (or
>   supported). You can
>   get merlin from
>   https://pypi.python.org/pypi/merlin/1.0
>
>   Regards,
>   Brad
>
>
>   On 05/26/2015 11:23 AM, Birendra jha wrote:
>   > Hi Brad
>   >
>   > I am getting error during 'make'
>   at nemesis:
>   >
>   >
>   configure: downloading missing Python dependencies
>   > configure: error: in
>   `/galileo/home/usera06agi/a06agi25/build/pylith/nemesis-build':
>   > configure: error: cannot download missing
>   Python dependencies
>   >
>   > I have attached build/pyith/config.log and
>   build/pylith/nemesis-build/config.log
>   >
>   > Any help will be
>   appreciated.
>   > Birendra
>   >
>   >
>   --------------------------------------------
>   > On Fri, 5/15/15, Brad Aagaard <baagaard at usgs.gov>
>   wrote:
>   >
>   >   Subject: Re: [CIG-SHORT]
>   missing installation files v1.8
>   >   To: cig-short at geodynamics.org
>   >   Date: Friday, May 15, 2015,
>   10:48 AM
>   >
>   >   Birendra,
>   >
>   >   CIG his
>   migrated the files to
>   >   a
>   new webserver
>   >   http://geoweb.cse.ucdavis.edu/~buildbot/deps
>   >
>   >   Regards,
>   >   Brad
>   >
>   >
>   >   On
>   >   05/15/2015 06:26 AM, Birendra
>   jha wrote:
>   >   > Hello
>   developers
>   >   >
>   >   > I am trying to install
>   pylith-1.8.0 using
>   >   the
>   installer and I get 404 error.
>   >   >
>   >   > Downloading
>   cppunit-1.12.1.tar.gz from
>   >   http://geodynamics.org/~buildbot/deps.
>   >   >
>   >   --2015-05-15 15:22:04--  http://geodynamics.org/~buildbot/deps/cppunit-1.12.1.tar.gz
>   >   > Resolving
>   geodynamics.org
>   >   (geodynamics.org)...
>   128.120.246.102,
>   >   2607:f810:c20:1c:a800:ff:fe59:2234
>   >   >
>   >   Connecting to
>   geodynamics.org
>   >   (geodynamics.org)|128.120.246.102|:80...
>   connected.
>   >   > HTTP
>   request sent, awaiting response...
>   >   404 Not Found
>   >   > 2015-05-15 15:22:05
>   ERROR
>   >   404: Not Found.
>   >   >
>   >   > I
>   >   understand that latest
>   version is recommended but I need
>   >   this version because of some
>   earlier work. Where can I get
>   >   these files now?
>   >   >
>   >   >
>   >   Thanks
>   >   > Birendra
>   >   >
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