[CIG-SHORT] Problem running user compiled version of Relax
Oliver Boyd
olboyd at usgs.gov
Wed Jun 24 15:34:24 PDT 2015
We didnĀ¹t fix the problem. We just didn't use the files that came out of the
git repository, but rather used those in the source tar ball from the CIG
website.
From: Sylvain Barbot <sylbar.vainbot at gmail.com>
Reply-To: <cig-short at geodynamics.org>
Date: Wednesday, June 24, 2015 3:44 PM
To: "cig-short at geodynamics.org" <cig-short at geodynamics.org>
Cc: Walter Landry <wlandry at caltech.edu>
Subject: Re: [CIG-SHORT] Problem running user compiled version of Relax
Hi Oliver,
Can you and Jeff let us know how you fixed the problem? I'd like to know if
and how I can improve the code.
Thanks,
Sylvain
On Wednesday, June 24, 2015, Oliver Boyd <olboyd at usgs.gov> wrote:
> Jeff Falgout at the USGS helped me to get it working. Looks like the
> libraries are fine, but there may be a problem with the git repository.
> When I build from the source tarball on the CIG website, it works fine.
>
> On 6/18/15 1:32 AM, "Walter Landry" <wlandry at caltech.edu <javascript:;> >
> wrote:
>
>> >Oliver Boyd <olboyd at usgs.gov <javascript:;> > wrote:
>>> >> forrtl: severe (174): SIGSEGV, segmentation fault occurred
>>> >> Image PC Routine Line
>>> >>Source
>>> >> relax 00000000005AF571 Unknown Unknown
>>> >>Unknown
>>> >> relax 00000000005ADCC7 Unknown Unknown
>>> >>Unknown
>>> >> relax 000000000055E794 Unknown Unknown
>>> >>Unknown
>>> >> relax 000000000055E5A6 Unknown Unknown
>>> >>Unknown
>>> >> relax 000000000050D184 Unknown Unknown
>>> >>Unknown
>>> >> relax 000000000051132D Unknown Unknown
>>> >>Unknown
>>> >> libpthread.so.0 0000003F77C0F710 Unknown Unknown
>>> >>Unknown
>>> >> relax 0000000000454AB7 Unknown Unknown
>>> >>Unknown
>>> >> relax 00000000004143E1 Unknown Unknown
>>> >>Unknown
>>> >> relax 0000000000410C6E Unknown Unknown
>>> >>Unknown
>>> >> libc.so.6 0000003F7701ED5D Unknown Unknown
>>> >>Unknown
>>> >> relax 0000000000410B79 Unknown Unknown
>>> >>Unknown
>>> >> srun: error: compute87: task 0: Exited with exit code 174
>> >
>> >It looks like you might be linking against the wrong library at run
>> >time. In your slurm script, run 'ldd' on the executable and make sure
>> >it links against the right libraries in the right places. If that
>> >does not work, we can try running it in a debugger.
>> >
>> >Cheers,
>> >Walter Landry
>
>
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