[CIG-SHORT] Problem running user compiled version of Relax

Oliver Boyd olboyd at usgs.gov
Wed Jun 24 15:34:24 PDT 2015


We didnĀ¹t fix the problem. We just didn't use the files that came out of the
git repository, but rather used those in the source tar ball from the CIG
website.

From:  Sylvain Barbot <sylbar.vainbot at gmail.com>
Reply-To:  <cig-short at geodynamics.org>
Date:  Wednesday, June 24, 2015 3:44 PM
To:  "cig-short at geodynamics.org" <cig-short at geodynamics.org>
Cc:  Walter Landry <wlandry at caltech.edu>
Subject:  Re: [CIG-SHORT] Problem running user compiled version of Relax

Hi Oliver,

Can you and Jeff let us know how you fixed the problem? I'd like to know if
and how I can improve the code.

Thanks,
Sylvain

On Wednesday, June 24, 2015, Oliver Boyd <olboyd at usgs.gov> wrote:
> Jeff Falgout at the USGS helped me to get it working. Looks like the
> libraries are fine, but there may be a problem with the git repository.
> When I build from the source tarball on the CIG website, it works fine.
> 
> On 6/18/15 1:32 AM, "Walter Landry" <wlandry at caltech.edu <javascript:;> >
> wrote:
> 
>> >Oliver Boyd <olboyd at usgs.gov <javascript:;> > wrote:
>>> >> forrtl: severe (174): SIGSEGV, segmentation fault occurred
>>> >> Image              PC                Routine            Line
>>> >>Source
>>> >> relax              00000000005AF571  Unknown               Unknown
>>> >>Unknown
>>> >> relax              00000000005ADCC7  Unknown               Unknown
>>> >>Unknown
>>> >> relax              000000000055E794  Unknown               Unknown
>>> >>Unknown
>>> >> relax              000000000055E5A6  Unknown               Unknown
>>> >>Unknown
>>> >> relax              000000000050D184  Unknown               Unknown
>>> >>Unknown
>>> >> relax              000000000051132D  Unknown               Unknown
>>> >>Unknown
>>> >> libpthread.so.0    0000003F77C0F710  Unknown               Unknown
>>> >>Unknown
>>> >> relax              0000000000454AB7  Unknown               Unknown
>>> >>Unknown
>>> >> relax              00000000004143E1  Unknown               Unknown
>>> >>Unknown
>>> >> relax              0000000000410C6E  Unknown               Unknown
>>> >>Unknown
>>> >> libc.so.6          0000003F7701ED5D  Unknown               Unknown
>>> >>Unknown
>>> >> relax              0000000000410B79  Unknown               Unknown
>>> >>Unknown
>>> >> srun: error: compute87: task 0: Exited with exit code 174
>> >
>> >It looks like you might be linking against the wrong library at run
>> >time.  In your slurm script, run 'ldd' on the executable and make sure
>> >it links against the right libraries in the right places.  If that
>> >does not work, we can try running it in a debugger.
>> >
>> >Cheers,
>> >Walter Landry
> 
> 
> _______________________________________________
> CIG-SHORT mailing list
> CIG-SHORT at geodynamics.org <javascript:;>
> http://lists.geodynamics.org/cgi-bin/mailman/listinfo/cig-short
_______________________________________________ CIG-SHORT mailing list
CIG-SHORT at geodynamics.org
http://lists.geodynamics.org/cgi-bin/mailman/listinfo/cig-short

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.geodynamics.org/pipermail/cig-short/attachments/20150624/a1bd4bd1/attachment.html>


More information about the CIG-SHORT mailing list