[CIG-SHORT] some confusion about modeling

fuqiang shi shifuqiang121 at gmail.com
Thu Feb 9 01:41:45 PST 2017


Dear,Sir,

  I am a new learner of cubit+pylith. I am sorry to disturb you for some
unexpected running errors, and I have tried all my best to solve them, but
no answer.
The error is totally like this:
Maybe it have some relation with the solver, but I haven't do any modify on
the solution parameter of the provided example.  I only modify the model
slightly and my model is also attached (s. attachment).
Your consideration and suggestions upon my request will be highly
appreciated. I am looking forward to your favorable reply at your earliest
convenience.

                                                                  Sincerely,


                                                               Fuqiang Shi


Linear solve did not converge due to DIVERGED_ITS iterations 100
[0]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[0]PETSC ERROR:
[0]PETSC ERROR: KSPSolve has not converged
[0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
[0]PETSC ERROR: Petsc Development GIT revision: v3.7.2-876-g7e45237  GIT
Date: 2016-06-16 04:41:50 -0500
[0]PETSC ERROR: /home/shifuqiang/pylith/bin/mpinemesis on a arch-pylith
named tecto-30 by shifuqiang Thu Feb  9 10:10:23 2017
[0]PETSC ERROR: Configure options --prefix=/home/brad/pylith-binary/dist
--with-c2html=0 --with-x=0 --with-clanguage=C --with-mpicompilers=1
--with-debugging=0 --with-shared-libraries=1 --with-64-bit-points=1
--with-large-file-io=1 --download-chaco=1 --download-ml=1
--download-f2cblaslapack=1 --with-hwloc=0 --with-ssl=0 --with-x=0
--with-c2html=0 --with-lgrind=0 --with-hdf5=1
--with-hdf5-dir=/home/brad/pylith-binary/dist
--LIBS=-lz --with-fc=0 CPPFLAGS="-I/home/brad/pylith-binary/dist/include "
LDFLAGS="-L/home/brad/pylith-binary/dist/lib " CFLAGS="-g -O2" CXXFLAGS="-g
-O2 -DMPICH_IGNORE_CXX_SEEK" FCFLAGS=
PETSC_DIR=/home/brad/pylith-binary/build/petsc-pylith
PETSC_ARCH=arch-pylith
[0]PETSC ERROR: #1 KSPSolve() line 847 in /home/brad/pylith-binary/
build/petsc-pylith/src/ksp/ksp/interface/itfunc.c
[0]PETSC ERROR: #2 void
pylith::problems::SolverLinear::solve(pylith::topology::Field*,
pylith::topology::Jacobian*, const pylith::topology::Field&)() line 132 in
../../../pylith-2.1.4/libsrc/pylith/problems/SolverLinear.cc
Fatal error. Calling MPI_Abort() to abort PyLith application.
Traceback (most recent call last):
  File "/home/shifuqiang/pylith/lib/python2.7/site-packages/
pylith/apps/PetscApplication.py", line 74, in onComputeNodes
    self.main(*args, **kwds)
  File "/home/shifuqiang/pylith/lib/python2.7/site-packages/pylith/apps/PyLithApp.py",
line 135, in main
    self.problem.run(self)
  File "/home/shifuqiang/pylith/lib/python2.7/site-packages/
pylith/problems/TimeDependent.py", line 155, in run
    self.formulation.step(t, dt)
  File "/home/shifuqiang/pylith/lib/python2.7/site-packages/pylith/problems/Implicit.py",
line 212, in step
    self.solver.solve(dispIncr, self.jacobian, residual)
  File "/home/shifuqiang/pylith/lib/python2.7/site-packages/pylith/problems/problems.py",
line 166, in solve
    def solve(self, *args): return _problems.SolverLinear_solve(self, *args)
RuntimeError: Error detected while in PETSc function.
application called MPI_Abort(MPI_COMM_WORLD, -1) - process 0
/home/shifuqiang/pylith/bin/nemesis: mpirun: exit 255
/home/shifuqiang/pylith/bin/pylith: /home/shifuqiang/pylith/bin/nemesis:
exit 1
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