[aspect-devel] Problem running ASPECT on Stampede2
John Naliboff
jbnaliboff at ucdavis.edu
Thu Jun 28 20:03:25 PDT 2018
Hi Felipe,
Can you pass on the section of code where the Linear solver tolerance is defined? Glad to hear you are otherwise up and running on Stampede2!
Cheers,
John
> On Jun 28, 2018, at 4:38 PM, FELIPE ORELLANA ROVIROSA <f_orellana at berkeley.edu> wrote:
>
>
> Hi all,
>
> I have installed ASPECT on Stampede2.
>
> I am getting error when running the test example parameter file for 3D convection.
>
> I am pasting the error message at the end. It fails on not getting the instruction for linear solver tolerance. At first I was using 16 nodes, 1088 cores. Then I used 1 node, 68 cores.
>
> Do you guys have a clue on what is happening?
>
> Should I compile the debug version?
>
> cheers,
> Felipe
>
> ibrun /work/04020/unfelipe/software/candi/aspect/aspect exAsp.prm
> TACC: Starting up job 1692989
> TACC: Starting parallel tasks...
> -----------------------------------------------------------------------------
> -- This is ASPECT, the Advanced Solver for Problems in Earth's ConvecTion.
> -- . version 2.0.1 (aspect-2.0, 2863594)
> -- . using deal.II 9.0.0
> -- . using Trilinos 12.10.1
> -- . using p4est 2.0.0
> -- . running in OPTIMIZED mode
> -- . running with 68 MPI processes
> -- How to cite ASPECT: https://aspect.geodynamics.org/cite.html <https://aspect.geodynamics.org/cite.html>
> -----------------------------------------------------------------------------
>
> Line <18> of file <input string>: No entry with name <Linear solver tolerance> was declared in the current subsection.
>
> ERROR: Uncaught exception in MPI_InitFinalize on proc 0. Skipping MPI_Finalize() to avoid a deadlock.
> ERROR: Uncaught exception in MPI_InitFinalize on proc 3. Skipping MPI_Finalize() to avoid a deadlock.ERROR: Uncaught exception in MPI_InitFinalize on proc 8. Skipping MPI_Finalize() to avoid a deadlock.ERROR: Uncaught exception in MPI_InitFinalize on proc 12. Skipping MPI_Finalize() to avoid a deadlock.
> ERROR: Uncaught exception in MPI_InitFinalize on proc 16. Skipping MPI_Finalize() to avoid a deadlock.
> ERROR: Uncaught exception in MPI_InitFinalize on proc 34. Skipping MPI_Finalize() to avoid a deadlock.
> ERROR: Uncaught exception in MPI_InitFinalize on proc 55. Skipping MPI_Finalize() to avoid a deadlock.
> ERROR: Uncaught exception in MPI_InitFinalize on proc 58. Skipping MPI_Finalize() to avoid a deadlock.
> ERROR: Uncaught exception in MPI_InitFinalize on proc 62. Skipping MPI_Finalize() to avoid a deadlock.
> ERROR: Uncaught exception in MPI_InitFinalize on proc 65. Skipping MPI_Finalize() to avoid a deadlock.
> ERROR: Uncaught exception in MPI_InitFinalize on proc 66. Skipping MPI_Finalize() to avoid a deadlock.
>
>
> ----------------------------------------------------
> Exception 'dealii::ExcMessage ("Invalid input parameter file.")' on rank 0 on processing:
> ERROR: Uncaught exception in MPI_InitFinalize on proc 1. Skipping MPI_Finalize() to avoid a deadlock.
>
> ERROR: Uncaught exception in MPI_InitFinalize on proc 4. Skipping MPI_Finalize() to avoid a deadlock.
>
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