[cig-commits] r8073 - doc/CitcomS/manual

[sue at geodynamics.org]

Author: sue
Date: 2007-10-02 15:50:08 -0700 (Tue, 02 Oct 2007)
New Revision: 8073

Modified:
   doc/CitcomS/manual/citcoms.lyx
Log:
a few typos fixed and redundant words removed

Modified: doc/CitcomS/manual/citcoms.lyx
===================================================================
--- doc/CitcomS/manual/citcoms.lyx	2007-10-01 20:43:52 UTC (rev 8072)
+++ doc/CitcomS/manual/citcoms.lyx	2007-10-02 22:50:08 UTC (rev 8073)
@@ -46,6 +46,7 @@
 \tracking_changes false
 \output_changes false
 \author "" 
+\author "" 
 \end_header
 
 \begin_body
@@ -302,7 +303,7 @@
  of the code, and 
 \begin_inset LatexCommand htmlurl
 name "CIG"
-target "www.geodynamics.org"
+target "geodynamics.org"
 
 \end_inset
 
@@ -631,11 +632,11 @@
  for the radial coordinate by Thorsten Becker; (9) an exchanger package
  for solver coupling; and (10) an option to disable monitoring of maximum
  temperature.
- Additional backward imcompatible changes include: (1) the viscosity field
+ Additional backward incompatible changes include: (1) the viscosity field
  at element level is not smoothed (this might slow down the convergence
  but will represent the viscosity field more accurately); (2) the Lenardic
  filter on temperature is disabled by default; (3) use of a better pseudo-random
- number generator to generate initial tracer.
+ number generator to generate the initial tracer.
 \end_layout
 
 \begin_layout Section
@@ -3059,9 +3060,8 @@
 \begin_layout Standard
 By default, CitComS will attempt to auto-detect your Exchanger installation
  and will disable Exchanger support if it is not found.
- You may explicitly specify the location of your Exchanger installation
- by setting the PYTHONPATH environment variable to the appropriate installation
- prefix.
+ You may specify the location of your Exchanger installation by setting
+ the PYTHONPATH environment variable to the appropriate installation prefix.
 \end_layout
 
 \begin_layout LyX-Code
@@ -3117,8 +3117,8 @@
 \begin_layout Standard
 By default, CitComS will attempt to auto-detect your PHDF5 installation,
  and will disable HDF5 support if it is not found.
- You may explicitly specify the location of your PHDF5 installation by setting
- the PHDF5_HOME environment variable to the appropriate installation prefix.
+ You may specify the location of your PHDF5 installation by setting the
+ PHDF5_HOME environment variable to the appropriate installation prefix.
 \end_layout
 
 \begin_layout LyX-Code
@@ -4855,8 +4855,8 @@
 \end_layout
 
 \begin_layout Standard
-On a cluster without a batch system, you need to explicitly specify the
- machines on which the job will run.
+On a cluster without a batch system, you need to specify on which machines
+ the job will run.
  Supposing the machines on your cluster are named n001, n002, \SpecialChar \ldots{}
 , etc., but
  you want to run the job on machines n001, n003, n004, and n005 (maybe n002
@@ -6651,7 +6651,7 @@
 pressure
 \family default
 ).
- These fields will be combined in seperated files, with filenames:
+ These fields will be combined in separated files, with filenames:
 \end_layout
 
 \begin_layout LyX-Code
@@ -6664,8 +6664,7 @@
 
 \begin_layout Standard
 The former file is the data file containing optional fields and is referred
- to as the ``optfile''.
- Its format is column-based ASCII data.
+ to as the ``optfile.'' Its format is column-based ASCII data.
  The latter file is the OpenDX header for the data.
  The header file contains information on the ordering of the optional fields.
 \end_layout
@@ -8908,8 +8907,8 @@
 \newline
 tic_method = -1 
 \newline
-solution_cyc
-les_init = 0
+solution_cycles_init
+ = 0
 \end_layout
 
 \begin_layout Standard
@@ -8987,12 +8986,12 @@
 \newline
 datafile_old = cookbook5
 \newline
-rayleigh
- = 4.07e+08
+rayleigh = 4.07e+08
 \newline
 
 \newline
-[CitcomS.solver.bc]
+[CitcomS.s
+olver.bc]
 \newline
 topvbc = 1
 \newline
@@ -9002,15 +9001,15 @@
 \newline
 file_vbcs = on
 \newline
-start_age
- = 55
+start_age = 55
 \newline
 
 \newline
-# Since the starting age is set to 55 Ma, there will be 56 velocity
+# Since
+ the starting age is set to 55 Ma, there will be 56 velocity
 \newline
-#
- files, one for each Ma (bvel.dat0, bvel.dat1, ...
+# files, one
+ for each Ma (bvel.dat0, bvel.dat1, ...
  bvel.dat56).
 \newline
 vel_bound_file = ./velocity/bvel.dat
@@ -9019,7 +9018,8 @@
 \newline
 [CitcomS.solver.ic]
 \newline
-tic_method = -1
+tic_method
+ = -1
 \newline
 solution_cycles_init = 0
 \newline
@@ -9031,7 +9031,8 @@
 \newline
 coor_file = ./coor.dat
 \newline
-nprocx = 1
+np
+rocx = 1
 \newline
 nprocy = 2
 \newline
@@ -9045,7 +9046,8 @@
 \newline
 theta_min = 1.47
 \newline
-theta_max = 1.67
+theta_m
+ax = 1.67
 \newline
 fi_min = 0
 \newline
@@ -9057,7 +9059,8 @@
 \newline
 [CitcomS.solver.visc]
 \newline
-num_mat = 4
+num_mat
+ = 4
 \newline
 visc0 = 100,0.003,1,2
 \newline