[cig-commits] r18626 - in short/3D/PyLith/trunk/doc/userguide/tutorials: 3dhex8 3dhex8/friction 3dhex8/gravity 3dhex8/quasistatic 3dhex8/static subduction
brad at geodynamics.org
brad at geodynamics.org
Tue Jun 14 16:32:44 PDT 2011
Author: brad
Date: 2011-06-14 16:32:44 -0700 (Tue, 14 Jun 2011)
New Revision: 18626
Modified:
short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/3dhex8.lyx
short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/friction/friction.lyx
short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/gravity/gravity.lyx
short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/quasistatic/quasistatic.lyx
short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/static/static.lyx
short/3D/PyLith/trunk/doc/userguide/tutorials/subduction/subduction.lyx
Log:
Cleanup of line breaks.
Modified: short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/3dhex8.lyx
===================================================================
--- short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/3dhex8.lyx 2011-06-14 22:58:01 UTC (rev 18625)
+++ short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/3dhex8.lyx 2011-06-14 23:32:44 UTC (rev 18626)
@@ -437,10 +437,14 @@
\begin_layout LyX-Code
reader = pylith.meshio.MeshIOCubit
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
-
+
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -462,10 +466,14 @@
\begin_layout LyX-Code
materials = [upper_crust,lower_crust]
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -490,10 +498,14 @@
\begin_layout LyX-Code
quadrature.cell.dimension = 3
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
-
+
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
Modified: short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/friction/friction.lyx
===================================================================
--- short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/friction/friction.lyx 2011-06-14 22:58:01 UTC (rev 18625)
+++ short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/friction/friction.lyx 2011-06-14 23:32:44 UTC (rev 18626)
@@ -1,5 +1,5 @@
-#LyX 1.6.5 created this file. For more info see http://www.lyx.org/
-\lyxformat 345
+#LyX 2.0 created this file. For more info see http://www.lyx.org/
+\lyxformat 413
\begin_document
\begin_header
\textclass book
@@ -7,18 +7,26 @@
\end_preamble
\use_default_options false
+\maintain_unincluded_children false
\language english
+\language_package default
\inputencoding latin1
+\fontencoding global
\font_roman default
\font_sans default
\font_typewriter default
\font_default_family default
+\use_non_tex_fonts false
\font_sc false
\font_osf false
\font_sf_scale 100
\font_tt_scale 100
\graphics default
+\default_output_format default
+\output_sync 0
+\bibtex_command default
+\index_command default
\paperfontsize default
\spacing single
\use_hyperref false
@@ -26,9 +34,18 @@
\use_geometry true
\use_amsmath 0
\use_esint 0
+\use_mhchem 1
+\use_mathdots 1
\cite_engine basic
\use_bibtopic false
+\use_indices false
\paperorientation portrait
+\suppress_date false
+\use_refstyle 0
+\index Index
+\shortcut idx
+\color #008000
+\end_index
\leftmargin 1in
\topmargin 1in
\rightmargin 1in
@@ -36,15 +53,16 @@
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
-\defskip medskip
+\paragraph_indentation default
\quotes_language english
\papercolumns 1
\papersides 1
\paperpagestyle default
\tracking_changes false
\output_changes false
-\author ""
-\author ""
+\html_math_output 0
+\html_css_as_file 0
+\html_be_strict false
\end_header
\begin_body
@@ -228,10 +246,14 @@
\begin_layout LyX-Code
fault = pylith.faults.FaultCohesiveDyn
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -387,6 +409,7 @@
\align center
\begin_inset Graphics
filename figs/step10-fault-traction-slip.jpg
+ lyxscale 50
width 10cm
\end_inset
@@ -539,6 +562,7 @@
\align center
\begin_inset Graphics
filename figs/step11-fault-traction-slip.jpg
+ lyxscale 50
width 10cm
\end_inset
@@ -666,10 +690,14 @@
\begin_layout LyX-Code
db_rate.data = [0.0*cm/year,1.0*cm/year,0.0*year]
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -773,6 +801,7 @@
\align center
\begin_inset Graphics
filename figs/step12-displ-t200.jpg
+ lyxscale 50
width 10cm
\end_inset
@@ -929,6 +958,7 @@
\align center
\begin_inset Graphics
filename figs/step13-displ-t200.jpg
+ lyxscale 50
width 10cm
\end_inset
@@ -1123,6 +1153,7 @@
\align center
\begin_inset Graphics
filename figs/step14-displ-t200.jpg
+ lyxscale 50
width 10cm
\end_inset
Modified: short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/gravity/gravity.lyx
===================================================================
--- short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/gravity/gravity.lyx 2011-06-14 22:58:01 UTC (rev 18625)
+++ short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/gravity/gravity.lyx 2011-06-14 23:32:44 UTC (rev 18626)
@@ -1,5 +1,5 @@
-#LyX 1.6.5 created this file. For more info see http://www.lyx.org/
-\lyxformat 345
+#LyX 2.0 created this file. For more info see http://www.lyx.org/
+\lyxformat 413
\begin_document
\begin_header
\textclass book
@@ -7,18 +7,26 @@
\end_preamble
\use_default_options false
+\maintain_unincluded_children false
\language english
+\language_package default
\inputencoding latin1
+\fontencoding global
\font_roman default
\font_sans default
\font_typewriter default
\font_default_family default
+\use_non_tex_fonts false
\font_sc false
\font_osf false
\font_sf_scale 100
\font_tt_scale 100
\graphics default
+\default_output_format default
+\output_sync 0
+\bibtex_command default
+\index_command default
\paperfontsize default
\spacing single
\use_hyperref false
@@ -26,9 +34,18 @@
\use_geometry true
\use_amsmath 0
\use_esint 0
+\use_mhchem 1
+\use_mathdots 1
\cite_engine basic
\use_bibtopic false
+\use_indices false
\paperorientation portrait
+\suppress_date false
+\use_refstyle 0
+\index Index
+\shortcut idx
+\color #008000
+\end_index
\leftmargin 1in
\topmargin 1in
\rightmargin 1in
@@ -36,15 +53,16 @@
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
-\defskip medskip
+\paragraph_indentation default
\quotes_language english
\papercolumns 1
\papersides 1
\paperpagestyle default
\tracking_changes false
\output_changes false
-\author ""
-\author ""
+\html_math_output 0
+\html_css_as_file 0
+\html_be_strict false
\end_header
\begin_body
@@ -153,8 +171,10 @@
zero.
Because all of the materials in the example have the same density, the
elastic solution for loading via gravitational body forces is
-\begin_inset Formula \begin{equation}
-\sigma_{zz}=\rho gh;\:\sigma_{xx}=\sigma_{yy}=\frac{\nu\rho gh}{1-\nu}\:.\label{eq:1-1}\end{equation}
+\begin_inset Formula
+\begin{equation}
+\sigma_{zz}=\rho gh;\:\sigma_{xx}=\sigma_{yy}=\frac{\nu\rho gh}{1-\nu}\:.\label{eq:1-1}
+\end{equation}
\end_inset
@@ -204,10 +224,14 @@
\begin_layout LyX-Code
time_step = pylith.problems.TimeStepAdapt
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -340,6 +364,7 @@
\align center
\begin_inset Graphics
filename figs/step15-displ-t200.jpg
+ lyxscale 50
width 10cm
\end_inset
@@ -451,10 +476,14 @@
\begin_layout LyX-Code
db_initial_stress.query_type = linear
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -517,6 +546,7 @@
\align center
\begin_inset Graphics
filename figs/step16-stress_xx-t200.jpg
+ lyxscale 50
width 10cm
\end_inset
@@ -661,6 +691,7 @@
\align center
\begin_inset Graphics
filename figs/step17-displ-t200.jpg
+ lyxscale 50
width 10cm
\end_inset
Modified: short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/quasistatic/quasistatic.lyx
===================================================================
--- short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/quasistatic/quasistatic.lyx 2011-06-14 22:58:01 UTC (rev 18625)
+++ short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/quasistatic/quasistatic.lyx 2011-06-14 23:32:44 UTC (rev 18626)
@@ -280,10 +280,14 @@
\begin_layout LyX-Code
materials.lower_crust = pylith.materials.MaxwellIsotropic3D
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -411,10 +415,14 @@
\begin_layout LyX-Code
db_rate.data = [0.0*cm/year,1.0*cm/year,0.0*year]
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -515,10 +523,14 @@
\begin_layout LyX-Code
writer.time_constant = 1.0*year
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -721,6 +733,14 @@
\begin_layout LyX-Code
db_initial.data = [0.0*MPa,0.0*MPa,-1.0*MPa]
+\begin_inset Newline newline
+\end_inset
+
+
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -768,6 +788,14 @@
\begin_layout LyX-Code
label = face_xneg
+\begin_inset Newline newline
+\end_inset
+
+
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -788,6 +816,14 @@
\begin_layout LyX-Code
db_initial.data = [0.0*cm,-0.5*cm]
+\begin_inset Newline newline
+\end_inset
+
+
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -944,10 +980,14 @@
\begin_layout LyX-Code
time_step = pylith.problems.TimeStepAdapt
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -993,10 +1033,13 @@
\begin_layout LyX-Code
# Give basename for output of solution over domain.
- [pylithapp.problem.formulation.output.domain]
\end_layout
\begin_layout LyX-Code
+[pylithapp.problem.formulation.output.domain]
+\end_layout
+
+\begin_layout LyX-Code
# We specify that output occurs in terms of a given time frequency, and
\end_layout
@@ -1010,10 +1053,14 @@
\begin_layout LyX-Code
time_step = 50.0*year
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -1049,19 +1096,26 @@
\begin_layout LyX-Code
# Give basename for output of solution over ground surface.
- [pylithapp.problem.formulation.output.subdomain]
\end_layout
\begin_layout LyX-Code
-# Name of nodeset for ground surface.
+[pylithapp.problem.formulation.output.subdomain]
\end_layout
\begin_layout LyX-Code
-label = face_zpos
+# Name of nodeset for ground surface.
\end_layout
\begin_layout LyX-Code
+label = face_zpos
+\begin_inset Newline newline
+\end_inset
+
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -1098,10 +1152,13 @@
\begin_layout LyX-Code
# Give basename for fault rupture output.
- [pylithapp.problem.interfaces.fault.output]
\end_layout
\begin_layout LyX-Code
+[pylithapp.problem.interfaces.fault.output]
+\end_layout
+
+\begin_layout LyX-Code
# We keep the default output frequency behavior (skip every n steps), and
\end_layout
@@ -1134,8 +1191,12 @@
\family typewriter
pylith.meshio.DataWriterHDF5SubMesh
\family default
- for subdomain output and
+ for subdomain output and
\family typewriter
+
+\begin_inset Newline newline
+\end_inset
+
pylith.meshio.DataWriterHDF5SubSubMesh
\family default
for fault output.
@@ -1224,10 +1285,14 @@
\begin_layout LyX-Code
slip_time.iohandler.filename = spatialdb/sliptime.spatialdb
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -1244,10 +1309,14 @@
\begin_layout LyX-Code
slip_time.iohandler.filename = spatialdb/sliptime.spatialdb
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -1477,10 +1546,14 @@
\begin_layout LyX-Code
db_rate.data = [0.0*cm/year,1.0*cm/year,0.0*year]
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -1538,7 +1611,10 @@
\begin_layout LyX-Code
# Give basename for output of solution over domain.
- [pylithapp.problem.formulation.output.domain]
+\begin_inset Newline newline
+\end_inset
+
+[pylithapp.problem.formulation.output.domain]
\end_layout
\begin_layout LyX-Code
@@ -1551,7 +1627,10 @@
\begin_layout LyX-Code
# We also request velocity output in addition to displacements.
- vertex_data_fields = [displacement,velocity]
+\begin_inset Newline newline
+\end_inset
+
+vertex_data_fields = [displacement,velocity]
\end_layout
\begin_layout LyX-Code
@@ -1560,10 +1639,14 @@
\begin_layout LyX-Code
time_step = 50.0*year
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -1576,35 +1659,49 @@
\begin_layout LyX-Code
writer.filename = output/step07.h5
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
# Give basename for output of solution over ground surface.
- [pylithapp.problem.formulation.output.subdomain]
\end_layout
\begin_layout LyX-Code
-# Name of nodeset for ground surface.
+[pylithapp.problem.formulation.output.subdomain]
\end_layout
\begin_layout LyX-Code
-label = face_zpos
+# Name of nodeset for ground surface.
\end_layout
\begin_layout LyX-Code
+label = face_zpos
+\begin_inset Newline newline
+\end_inset
+
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
# We also request velocity output in addition to displacements.
- vertex_data_fields = [displacement,velocity]
\end_layout
\begin_layout LyX-Code
+vertex_data_fields = [displacement,velocity]
+\end_layout
+
+\begin_layout LyX-Code
# We keep the default output frequency behavior (skip every n steps), and
\end_layout
@@ -1614,10 +1711,14 @@
\begin_layout LyX-Code
skip = 0
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
Modified: short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/static/static.lyx
===================================================================
--- short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/static/static.lyx 2011-06-14 22:58:01 UTC (rev 18625)
+++ short/3D/PyLith/trunk/doc/userguide/tutorials/3dhex8/static/static.lyx 2011-06-14 23:32:44 UTC (rev 18626)
@@ -1,5 +1,5 @@
-#LyX 1.6.5 created this file. For more info see http://www.lyx.org/
-\lyxformat 345
+#LyX 2.0 created this file. For more info see http://www.lyx.org/
+\lyxformat 413
\begin_document
\begin_header
\textclass book
@@ -7,18 +7,26 @@
\end_preamble
\use_default_options false
+\maintain_unincluded_children false
\language english
+\language_package default
\inputencoding latin1
+\fontencoding global
\font_roman default
\font_sans default
\font_typewriter default
\font_default_family default
+\use_non_tex_fonts false
\font_sc false
\font_osf false
\font_sf_scale 100
\font_tt_scale 100
\graphics default
+\default_output_format default
+\output_sync 0
+\bibtex_command default
+\index_command default
\paperfontsize default
\spacing single
\use_hyperref false
@@ -26,9 +34,18 @@
\use_geometry true
\use_amsmath 0
\use_esint 0
+\use_mhchem 1
+\use_mathdots 1
\cite_engine basic
\use_bibtopic false
+\use_indices false
\paperorientation portrait
+\suppress_date false
+\use_refstyle 0
+\index Index
+\shortcut idx
+\color #008000
+\end_index
\leftmargin 1in
\topmargin 1in
\rightmargin 1in
@@ -36,15 +53,16 @@
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
-\defskip medskip
+\paragraph_indentation default
\quotes_language english
\papercolumns 1
\papersides 1
\paperpagestyle default
\tracking_changes false
\output_changes false
-\author ""
-\author ""
+\html_math_output 0
+\html_css_as_file 0
+\html_be_strict false
\end_header
\begin_body
@@ -278,10 +296,14 @@
\begin_layout LyX-Code
db_initial.iohandler.filename = spatialdb/fixeddisp_axial_shear.spatialdb
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -493,10 +515,14 @@
\begin_layout LyX-Code
db_initial.iohandler.filename = spatialdb/tractions_axial_shear.spatialdb
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -575,6 +601,7 @@
\align center
\begin_inset Graphics
filename figs/step02-displ.jpg
+ lyxscale 50
width 10cm
\end_inset
@@ -688,10 +715,14 @@
\begin_layout LyX-Code
label = fault
-\end_layout
+\begin_inset Newline newline
+\end_inset
-\begin_layout LyX-Code
+\begin_inset Newline newline
+\end_inset
+
+
\end_layout
\begin_layout LyX-Code
@@ -803,6 +834,7 @@
\align center
\begin_inset Graphics
filename figs/step03-displ.jpg
+ lyxscale 50
width 10cm
\end_inset
Modified: short/3D/PyLith/trunk/doc/userguide/tutorials/subduction/subduction.lyx
===================================================================
--- short/3D/PyLith/trunk/doc/userguide/tutorials/subduction/subduction.lyx 2011-06-14 22:58:01 UTC (rev 18625)
+++ short/3D/PyLith/trunk/doc/userguide/tutorials/subduction/subduction.lyx 2011-06-14 23:32:44 UTC (rev 18626)
@@ -1030,7 +1030,18 @@
Modify the spatial database files for the material properties to use depth-depen
dent elastic properties based on PREM (Dziewonski and Anderson, 1981, 10.1016/003
1-9201(81)90046-7).
- See http://geophysics.ou.edu/solid_earth/prem.html for a simple table of values.
+ See
+\begin_inset Flex URL
+status open
+
+\begin_layout Plain Layout
+
+geophysics.ou.edu/solid_earth/prem.html
+\end_layout
+
+\end_inset
+
+ for a simple table of values.
Add points, update num-locs accordingly, and change data-dim to be 1.
\end_layout
@@ -1042,8 +1053,11 @@
\begin_layout Itemize
Create a simulation with multiple earthquake cycles by lengthening the duration
of the simulation and adding additional earthquake ruptures.
- See examples/3d/hex8/step06.cfg for an example with multiple earthquake
- ruptures.
+ See
+\family typewriter
+examples/3d/hex8/step06.cfg
+\family default
+ for an example with multiple earthquake ruptures.
Examine spinup towards a steady-state solution.
\end_layout
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