[CIG-GEODYN] Questions about Calypso running

Hiroaki Matsui h.kemono at gmail.com
Fri Sep 5 12:33:52 PDT 2014


Hi, Alex,

Well, looking at a output, program tried to read these restarting files.
Please check if these files are there in rst_4 directory. If there are no files, it should stop at this point.

It happened in Ver1.0.0 because I accidentally include the control_MHD for starting with these restart file.
I changed the setting of the control file to start initial step (without using restating file) in Ver 1.1.
And, i just double checked the latest version in github.
Could you check the which version you have now.

Thanks,
Hiro.

> 
> 
> Hi, I'm Alex from University of Chinese Academy of Sciences(UCAS). These days I have been focusing on geodynamo theory, so I'm trying to use Calypso to improve my research. When I ran the example dynamobenchmark_case_1 using the command mpirun -np 4 [Calypso_dir]/bin/sph_mhd ,I met some problems as follows:
> 
>  Read ascii data file: rst_4/rst.2.0.fst
> At line 43 of file /home/lizhencun/software/calypso-1.1.1/src/Fortran_libraries/SERIAL_src/IO/skip_comment_f.f90 (unit = 15, file = 'rst_4/rst.2.0.fst')
> Fortran runtime error: End of file
> At line 43 of file /home/lizhencun/software/calypso-1.1.1/src/Fortran_libraries/SERIAL_src/IO/skip_comment_f.f90 (unit = 15, file = 'rst_4/rst.2.2.fst')
> Fortran runtime error: End of file
> At line 43 of file /home/lizhencun/software/calypso-1.1.1/src/Fortran_libraries/SERIAL_src/IO/skip_comment_f.f90 (unit = 15, file = 'rst_4/rst.2.1.fst')
> Fortran runtime error: End of file
> At line 43 of file /home/lizhencun/software/calypso-1.1.1/src/Fortran_libraries/SERIAL_src/IO/skip_comment_f.f90 (unit = 15, file = 'rst_4/rst.2.3.fst')
> Fortran runtime error: End of file
> 
> For my opinion, there are some problems with the generation of rst.2.0.fst(also rst.2.2.fst、rst.2.1.fst and rst.2.3.fst) file, but I don't know what the exact point is.My gfortran' version is GNU Fortran (Ubuntu/Linaro 4.6.3-1ubuntu5) 4.6.3 and my MPI library is OpenMPI-1.6.5, I use ubuntu 12.04 as my system. So could you tell me how I can fix this problem ,please? I will be great appreciated for your help!
> 
> Best,
> Alex
> 
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