[CIG-LONG] Gale

Ritske S. Huismans Ritske.Huismans at geo.uib.no
Sun Sep 21 12:44:39 PDT 2008


Hello Walter, 

thanks for the  reply. 

The error message starts like this and continues. 

[0]PETSC ERROR: [29]PETSC ERROR:
------------------------------------------------------------------------
[21]PETSC ERROR:
------------------------------------------------------------------------
[13]PETSC ERROR:
------------------------------------------------------------------------
[13]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation,
probably memory access out of range
[13]PETSC ERROR: Try option -start_in_debugger or
-on_error_attach_debugger
[13]PETSC ERROR: or see
http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html
#Signal[13]PETSC ERROR: or try http://valgrind.org on linux or man
libgmalloc on Apple to find memory corruption errors
[7]PETSC ERROR:
------------------------------------------------------------------------
[31]PETSC ERROR:
------------------------------------------------------------------------
[29]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation,
probably memory access out of range
[29]PETSC ERROR: Try option -start_in_debugger or
-on_error_attach_debugger
[29]PETSC ERROR: or see
http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html
#Signal[29]PETSC ERROR: or try http://valgrind.org on linux or man
libgmalloc on Apple to find memory corruption errors
[29]PETSC ERROR: likely location of problem given in stack below

and continues like this. 
the 1 cpu job has the same error. 

Thanks, 
Ritske


"Ritske S. Huismans" <Ritske.Huismans at geo.uib.no> wrote:
> Hello, 
> 
> I am interested to use Gale for comparison with other ALE codes in
> 2D/3D. 
> I have installed Gale on our system, it runs the basic tests fine. 
> 
> some questions / comments that I am happy to get some feedback on: 
> 1. There are some small differences in model results from visual
> comparison with the Gale manual. 
> 
> 2. Most notably, the 2D Tibet example does not show plastic
localisation
> when I run it, not sure what may be different. 

It has been a while since I ran it, and the implementation of Mohr
Coulomb has changed a lot since then.  I should run it again.

> 3. I have tried to run the tibet3d.xml example but get memory failures
> of ptsc, even if I reduce the model resolution to 
> something small, e.g. 16 x 16 x 4
> I have tried to run this last example at 256 cpu with 1 Gb/core. this
> should be enough. 

It may be that petsc is catching a place where Gale is writing to
invalid memory.  What is the exact error that you get?  For the small
model, can you run it on one processor?

> I am especially interested in feedback how to get Gale running for 3D
> problems including plastic localisation. 
> Thanks for any comments you can give in this regard, 

I am out of town right now, so it will take me a few days to run these
models again.

Cheers,
Walter Landry
walter at geodynamics.org


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