[CIG-MC] Fwd: MPI_Isend error
Magali Billen
mibillen at ucdavis.edu
Tue Nov 17 16:51:01 PST 2009
One correction to the e-mail below, we've been compiling CitcomCU
using openmpi on our old
cluster, so the compiler on the new cluster is the same. The big
difference is that the cluster
is about twice as fast as the 5-year old cluster. This suggests that
this change to a much faster
clsuter may have exposed an existing race condition in CitcomCU??
Magali
Begin forwarded message:
> From: Magali Billen <mibillen at ucdavis.edu>
> Date: November 17, 2009 4:23:45 PM PST
> To: cig-mc at geodynamics.org
> Subject: [CIG-MC] MPI_Isend error
>
> Hello,
>
> I'm using CitcomCU and am having a strange problem with problem
> either hanging (no error, just doesn't
> go anywhere) or it dies with an MPI_Isend error (see below). I seem
> to recall having problems with the MPI_Isend
> command and the lam-mpi version of mpi, but I've not had any
> problems with mpich-2.
> On the new cluster we are compling with openmpi instead of MPICH-2.
>
> The MPI_Isend error seems to occur during Initialization in the call
> to the function mass_matrix, which then
> calls exchange_node_f20, which is where the call to MPI_Isend is.
>
> --snip--
> ok14: parallel shuffle element and id arrays
> ok15: construct shape functions
> [farm.caes.ucdavis.edu:27041] *** An error occurred in MPI_Isend
> [farm.caes.ucdavis.edu:27041] *** on communicator MPI_COMM_WORLD
> [farm.caes.ucdavis.edu:27041] *** MPI_ERR_RANK: invalid rank
> [farm.caes.ucdavis.edu:27041] *** MPI_ERRORS_ARE_FATAL (your MPI job
> will now abort)
>
> Has this (or these) types of error occurred for other versions of
> Citcom using MPI_Isend (it seems that CitcomS uses
> this command also). I'm not sure how to debug this error,
> especially since sometimes it just hangs with no error.
>
> Any advice you have would be hepful,
> Magali
>
>
> -----------------------------
> Associate Professor, U.C. Davis
> Department of Geology/KeckCAVEs
> Physical & Earth Sciences Bldg, rm 2129
> Davis, CA 95616
> -----------------
> mibillen at ucdavis.edu
> (530) 754-5696
> -----------------------------
> ** Note new e-mail, building, office
> information as of Sept. 2009 **
> -----------------------------
>
> _______________________________________________
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-----------------------------
Associate Professor, U.C. Davis
Department of Geology/KeckCAVEs
Physical & Earth Sciences Bldg, rm 2129
Davis, CA 95616
-----------------
mibillen at ucdavis.edu
(530) 754-5696
-----------------------------
** Note new e-mail, building, office
information as of Sept. 2009 **
-----------------------------
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