[CIG-MC] citcoms and cookbook3 example

Eh Tan tan2 at geodynamics.org
Fri Jul 16 19:46:26 PDT 2010


Hi Logan,

You are mixing the C-only binary (CitcomSFull) and the input file 
(cookbook3.cfg) for the python-embedded binary. There are only two input 
examples (in examples/Full and examples/Regional) for C-only binary. The 
rest of cookbook examples are for the python embedded binary only. The 
distinction of these two binaries is explained in the beginning of 
Chapter 3 in the manual.

Cheers,
Eh


On 7/13/10 10:37 PM, Sankaran, Loganathan (Solution Technology Services) 
wrote:
>
> Hello,
>
> I am new to CitcomS.  I just built the code and started a run on a 
> single node (12 cores) as:
>
> mpirun -np 4 CitcomSFull cookbook3.cfg >& cbook3.4.out
>
> However, I get an error such as:
>
> node   0: error: error: either use z_layer for non dim layer depths, 
> or set num_mat to four
>
> node   1: error: error: either use z_layer for non dim layer depths, 
> or set num_mat to four
>
> The num_mat is already set to 4 in the cfg file.  How do I make this 
> work ?
>
> I tried the cookbook1 and is asking me to set nodex, nodey which are 
> not set in the cfg file.
>
> What are the recommended values to these and nodez, if needed ?
>
> Thanks.
>
> Logan
>
> Logan Sankaran Ph.D.**
>
> Sr. Performance Specialist, HPC Benchmarking
>
> Solution Technology Services (STS)
>
> Americas Shared Solutions Architecture (SSA)//
>
> *Hewlett-Packard Company *
>
> *PLANO, Texas, USA*
>
> * *
>
>  972 - 727 - 9561
>
> logan.sankaran at hp.com <mailto:logan.sankaran at hp.com>
>
>
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