[CIG-SEISMO] Specfem3d_Globe Movie problem

Inchin, Pavel INCHINP at my.erau.edu
Wed Mar 28 07:58:19 PDT 2018


Good day,

I have a problem with running of SPECFEM3D Globe on a cluster.

When I run it with
MOVIE_SURFACE = .false. and MOVIE_VOLUME=.false., the simulation runs without problems.

But if I want to output movie, xspecfem3D gives error:

forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image              PC                Routine            Line        Source
xspecfem3D         00000000006376E4  Unknown               Unknown  Unknown
libpthread-2.17.s  00002AAAAC1C95E0  Unknown               Unknown  Unknown
xspecfem3D         00000000005CF907  Unknown               Unknown  Unknown
xspecfem3D         00000000004F0E18  Unknown               Unknown  Unknown
xspecfem3D         00000000004EF900  Unknown               Unknown  Unknown
xspecfem3D         0000000000507C23  Unknown               Unknown  Unknown
xspecfem3D         00000000005CA25D  Unknown               Unknown  Unknown
xspecfem3D         00000000004044DE  Unknown               Unknown  Unknown
libc-2.17.so   00002AAAAC6F9C05  __libc_start_main     Unknown  Unknown
xspecfem3D         00000000004043E9  Unknown               Unknown  Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image              PC                Routine            Line        Source
xspecfem3D         00000000006376E4  Unknown               Unknown  Unknown
libpthread-2.17.s  00002AAAAC1C95E0  Unknown               Unknown  Unknown
xspecfem3D         00000000005CF907  Unknown               Unknown  Unknown
xspecfem3D         00000000004F0E18  Unknown               Unknown  Unknown
xspecfem3D         00000000004EF900  Unknown               Unknown  Unknown
xspecfem3D         0000000000507C23  Unknown               Unknown  Unknown
xspecfem3D         00000000005CA25D  Unknown               Unknown  Unknown
xspecfem3D         00000000004044DE  Unknown               Unknown  Unknown
libc-2.17.so   00002AAAAC6F9C05  __libc_start_main     Unknown  Unknown
xspecfem3D         00000000004043E9  Unknown               Unknown  Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image              PC                Routine            Line        Source
xspecfem3D         00000000006376E4  Unknown               Unknown  Unknown
libpthread-2.17.s  00002AAAAC1C95E0  Unknown               Unknown  Unknown
xspecfem3D         00000000005CF907  Unknown               Unknown  Unknown
xspecfem3D         00000000004F0E18  Unknown               Unknown  Unknown
xspecfem3D         00000000004EF900  Unknown               Unknown  Unknown
xspecfem3D         0000000000507C23  Unknown               Unknown  Unknown
xspecfem3D         00000000005CA25D  Unknown               Unknown  Unknown
xspecfem3D         00000000004044DE  Unknown               Unknown  Unknown
libc-2.17.so   00002AAAAC6F9C05  __libc_start_main     Unknown  Unknown
xspecfem3D         00000000004043E9  Unknown               Unknown  Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image              PC                Routine            Line        Source
xspecfem3D         00000000006376E4  Unknown               Unknown  Unknown
libpthread-2.17.s  00002AAAAC1C95E0  Unknown               Unknown  Unknown
xspecfem3D         00000000005CF907  Unknown               Unknown  Unknown
xspecfem3D         00000000004F0E18  Unknown               Unknown  Unknown
xspecfem3D         00000000004EF900  Unknown               Unknown  Unknown
xspecfem3D         0000000000507C23  Unknown               Unknown  Unknown
xspecfem3D         00000000005CA25D  Unknown               Unknown  Unknown
xspecfem3D         00000000004044DE  Unknown               Unknown  Unknown
libc-2.17.so   00002AAAAC6F9C05  __libc_start_main     Unknown  Unknown
xspecfem3D         00000000004043E9  Unknown               Unknown  Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image              PC                Routine            Line        Source
xspecfem3D         00000000006376E4  Unknown               Unknown  Unknown
libpthread-2.17.s  00002AAAAC1C95E0  Unknown               Unknown  Unknown
xspecfem3D         00000000005CF907  Unknown               Unknown  Unknown
xspecfem3D         00000000004F0E18  Unknown               Unknown  Unknown
xspecfem3D         00000000004EF900  Unknown               Unknown  Unknown
xspecfem3D         0000000000507C23  Unknown               Unknown  Unknown
xspecfem3D         00000000005CA25D  Unknown               Unknown  Unknown
xspecfem3D         00000000004044DE  Unknown               Unknown  Unknown
libc-2.17.so   00002AAAAC6F9C05  __libc_start_main     Unknown  Unknown
xspecfem3D         00000000004043E9  Unknown               Unknown  Unknown
………….

I compile using: ./configure FC=mpiifort MPIFC=mpiifort -mcmodel=medium-shared-intel

And my modules are:
intel/compiler/64/2017/17.0.5
intel/mpi/64/2017/5.239


I found this issue raised earlier (https://github.com/geodynamics/specfem3d/issues/512), but with running of the model by itself and not for movie…

Could you provide a direction where to find a reason for that?

Thank you
Paul

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