[CIG-SHORT] "make check" error upon updating PyLith

Tue Mar 29 14:32:44 PDT 2011

Jeff-

Your makeCheck.log file does not match the information you included in 
your email message. The makeCheck.log shows all libtests passing and 
some pytests related to FIAT failing, so I can't tell which tests are 
really failing and which are passing. All of the unit tests pass on my 
machine and on the buildbots, so I suspect your environment is not being 
setup consistently.

I recommend checking your environment variables carefully to make sure 
you have just one version of PyLith in your path and that the values are 
consistent with those used when you configured PyLith. In other words, 
make sure PATH, LD_LIBRARY_PATH (or DYLD_LIBRARY_PATH on darwin), and 
PYTHONPATH are up-to-date and consistent. You should also make sure any 
old FIAT versions are removed (remove the FIAT directory from 
$PREFIX/lib/python2.5/site-packages).

Brad

On 03/29/2011 01:29 PM, Jeffrey Thompson wrote:
> Hi CIG-Short,
>
> I'm trying to update my version of PyLith, and I ran into a problem with
> feassemble during the make check.  I've attached my PyLith configuration
> logs, as well as the make and makeCheck logs to this email.  Below, I've
> also copied the text dumped by the "make check" into the terminal.  I
> updated petsc-dev (using it to download scientificpython and fiat) as well
> as PyLith while trying to update PyLith.
>
> Thanks for the help,
> Jeff Thompson
> Caltech Seismolab
>
>
> creating testfeassemble
> make[5]: Leaving directory
> `/home/jeffremt/tools/cig/v1.5-stable/unittests/libtests/feassemble'
> make  check-TESTS
> make[5]: Entering directory
> `/home/jeffremt/tools/cig/v1.5-stable/unittests/libtests/feassemble'
> pylith::feassemble::TestCellGeometry::testOrient0D : OK
> pylith::feassemble::TestCellGeometry::testOrient1D : OK
> pylith::feassemble::TestCellGeometry::testOrient2D : OK
> pylith::feassemble::TestGeometryPoint1D::testConstructor : OK
> pylith::feassemble::TestGeometryPoint1D::testClone : OK
> pylith::feassemble::TestGeometryPoint1D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryPoint1D::testCellDim : OK
> pylith::feassemble::TestGeometryPoint1D::testSpaceDim : OK
> pylith::feassemble::TestGeometryPoint1D::testNumCorners : OK
> pylith::feassemble::TestGeometryPoint1D::testOrientFn : OK
> pylith::feassemble::TestGeometryPoint1D::testJacobian : OK
> pylith::feassemble::TestGeometryPoint2D::testConstructor : OK
> pylith::feassemble::TestGeometryPoint2D::testClone : OK
> pylith::feassemble::TestGeometryPoint2D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryPoint2D::testCellDim : OK
> pylith::feassemble::TestGeometryPoint2D::testSpaceDim : OK
> pylith::feassemble::TestGeometryPoint2D::testNumCorners : OK
> pylith::feassemble::TestGeometryPoint2D::testOrientFn : OK
> pylith::feassemble::TestGeometryPoint2D::testJacobian : OK
> pylith::feassemble::TestGeometryPoint3D::testConstructor : OK
> pylith::feassemble::TestGeometryPoint3D::testClone : OK
> pylith::feassemble::TestGeometryPoint3D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryPoint3D::testCellDim : OK
> pylith::feassemble::TestGeometryPoint3D::testSpaceDim : OK
> pylith::feassemble::TestGeometryPoint3D::testNumCorners : OK
> pylith::feassemble::TestGeometryPoint3D::testOrientFn : OK
> pylith::feassemble::TestGeometryPoint3D::testJacobian : OK
> pylith::feassemble::TestGeometryLine1D::testConstructor : OK
> pylith::feassemble::TestGeometryLine1D::testClone : OK
> pylith::feassemble::TestGeometryLine1D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryLine1D::testCellDim : OK
> pylith::feassemble::TestGeometryLine1D::testSpaceDim : OK
> pylith::feassemble::TestGeometryLine1D::testNumCorners : OK
> pylith::feassemble::TestGeometryLine1D::testOrientFn : OK
> pylith::feassemble::TestGeometryLine1D::testJacobian : OK
> pylith::feassemble::TestGeometryLine2D::testConstructor : OK
> pylith::feassemble::TestGeometryLine2D::testClone : OK
> pylith::feassemble::TestGeometryLine2D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryLine2D::testCellDim : OK
> pylith::feassemble::TestGeometryLine2D::testSpaceDim : OK
> pylith::feassemble::TestGeometryLine2D::testNumCorners : OK
> pylith::feassemble::TestGeometryLine2D::testOrientFn : OK
> pylith::feassemble::TestGeometryLine2D::testJacobian : OK
> pylith::feassemble::TestGeometryLine3D::testConstructor : OK
> pylith::feassemble::TestGeometryLine3D::testClone : OK
> pylith::feassemble::TestGeometryLine3D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryLine3D::testCellDim : OK
> pylith::feassemble::TestGeometryLine3D::testSpaceDim : OK
> pylith::feassemble::TestGeometryLine3D::testNumCorners : OK
> pylith::feassemble::TestGeometryLine3D::testOrientFn : OK
> pylith::feassemble::TestGeometryLine3D::testJacobian : OK
> pylith::feassemble::TestGeometryTri2D::testConstructor : OK
> pylith::feassemble::TestGeometryTri2D::testClone : OK
> pylith::feassemble::TestGeometryTri2D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryTri2D::testCellDim : OK
> pylith::feassemble::TestGeometryTri2D::testSpaceDim : OK
> pylith::feassemble::TestGeometryTri2D::testNumCorners : OK
> pylith::feassemble::TestGeometryTri2D::testOrientFn : OK
> pylith::feassemble::TestGeometryTri2D::testJacobian : OK
> pylith::feassemble::TestGeometryTri3D::testConstructor : OK
> pylith::feassemble::TestGeometryTri3D::testClone : OK
> pylith::feassemble::TestGeometryTri3D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryTri3D::testCellDim : OK
> pylith::feassemble::TestGeometryTri3D::testSpaceDim : OK
> pylith::feassemble::TestGeometryTri3D::testNumCorners : OK
> pylith::feassemble::TestGeometryTri3D::testOrientFn : OK
> pylith::feassemble::TestGeometryTri3D::testJacobian : OK
> pylith::feassemble::TestGeometryQuad2D::testConstructor : OK
> pylith::feassemble::TestGeometryQuad2D::testClone : OK
> pylith::feassemble::TestGeometryQuad2D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryQuad2D::testCellDim : OK
> pylith::feassemble::TestGeometryQuad2D::testSpaceDim : OK
> pylith::feassemble::TestGeometryQuad2D::testNumCorners : OK
> pylith::feassemble::TestGeometryQuad2D::testOrientFn : OK
> pylith::feassemble::TestGeometryQuad2D::testJacobian : OK
> pylith::feassemble::TestGeometryQuad3D::testConstructor : OK
> pylith::feassemble::TestGeometryQuad3D::testClone : OK
> pylith::feassemble::TestGeometryQuad3D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryQuad3D::testCellDim : OK
> pylith::feassemble::TestGeometryQuad3D::testSpaceDim : OK
> pylith::feassemble::TestGeometryQuad3D::testNumCorners : OK
> pylith::feassemble::TestGeometryQuad3D::testOrientFn : OK
> pylith::feassemble::TestGeometryQuad3D::testJacobian : OK
> pylith::feassemble::TestGeometryTet3D::testConstructor : OK
> pylith::feassemble::TestGeometryTet3D::testClone : OK
> pylith::feassemble::TestGeometryTet3D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryTet3D::testCellDim : OK
> pylith::feassemble::TestGeometryTet3D::testSpaceDim : OK
> pylith::feassemble::TestGeometryTet3D::testNumCorners : OK
> pylith::feassemble::TestGeometryTet3D::testOrientFn : OK
> pylith::feassemble::TestGeometryTet3D::testJacobian : OK
> pylith::feassemble::TestGeometryHex3D::testConstructor : OK
> pylith::feassemble::TestGeometryHex3D::testClone : OK
> pylith::feassemble::TestGeometryHex3D::testGeomLowerDim : OK
> pylith::feassemble::TestGeometryHex3D::testCellDim : OK
> pylith::feassemble::TestGeometryHex3D::testSpaceDim : OK
> pylith::feassemble::TestGeometryHex3D::testNumCorners : OK
> pylith::feassemble::TestGeometryHex3D::testOrientFn : OK
> pylith::feassemble::TestGeometryHex3D::testJacobian : OK
> pylith::feassemble::TestQuadratureRefCell::testConstructor : OK
> pylith::feassemble::TestQuadratureRefCell::testMinJacobian : OK
> pylith::feassemble::TestQuadratureRefCell::testRefGeometry : OK
> pylith::feassemble::TestQuadratureRefCell::testInitialize : OK
> pylith::feassemble::TestQuadratureEngine::testCopyConstructor : OK
> pylith::feassemble::TestQuadratureEngine::testInitialize : OK
> pylith::feassemble::TestQuadrature0D::testConstructor : OK
> pylith::feassemble::TestQuadrature0D::testPoint : OK
> pylith::feassemble::TestQuadrature1D::testConstructor : OK
> pylith::feassemble::TestQuadrature1D::testLinear : OK
> pylith::feassemble::TestQuadrature1D::testQuadratic : OK
> pylith::feassemble::TestQuadrature1Din2D::testConstructor : OK
> pylith::feassemble::TestQuadrature1Din2D::testLinear : OK
> pylith::feassemble::TestQuadrature1Din2D::testQuadratic : OK
> pylith::feassemble::TestQuadrature1Din3D::testConstructor : OK
> pylith::feassemble::TestQuadrature1Din3D::testLinear : OK
> pylith::feassemble::TestQuadrature1Din3D::testQuadratic : OK
> pylith::feassemble::TestQuadrature2D::testConstructor : OK
> pylith::feassemble::TestQuadrature2D::testLinear : OK
> pylith::feassemble::TestQuadrature2D::testQuadratic : OK
> pylith::feassemble::TestQuadrature2Din3D::testConstructor : OK
> pylith::feassemble::TestQuadrature2Din3D::testLinearXYZ : OK
> pylith::feassemble::TestQuadrature2Din3D::testLinearXY : OK
> pylith::feassemble::TestQuadrature2Din3D::testLinearYZ : OK
> pylith::feassemble::TestQuadrature2Din3D::testLinearXZ : OK
> pylith::feassemble::TestQuadrature2Din3D::testQuadratic : OK
> pylith::feassemble::TestQuadrature3D::testConstructor : OK
> pylith::feassemble::TestQuadrature3D::testLinear : OK
> pylith::feassemble::TestQuadrature3D::testQuadratic : OK
> pylith::feassemble::TestQuadrature::testCopyConstructor : OK
> pylith::feassemble::TestQuadrature::testCheckConditioning : OK
> pylith::feassemble::TestQuadrature::testEngineAccessors : OK
> pylith::feassemble::TestQuadrature::testComputeGeometry : OK
> pylith::feassemble::TestQuadrature::testComputeGeometryCell : OK
> pylith::feassemble::TestIntegrator::testTimeStep : OK
> pylith::feassemble::TestIntegrator::testStableTimeStep : OK
> pylith::feassemble::TestIntegrator::testIsJacobianSymmetric : OK
> pylith::feassemble::TestIntegrator::testQuadrature : OK
> pylith::feassemble::TestIntegrator::testNormalizer : OK
> pylith::feassemble::TestIntegrator::testGravityField : OK
> pylith::feassemble::TestIntegrator::testInitCellVector : OK
> pylith::feassemble::TestIntegrator::testResetCellVector : OK
> pylith::feassemble::TestIntegrator::testInitCellMatrix : OK
> pylith::feassemble::TestIntegrator::testResetCellMatrix : OK
> pylith::feassemble::TestIntegrator::testLumpCellMatrix : OK
> pylith::feassemble::TestIntegrator::testSplitField : OK
> pylith::feassemble::TestIntegratorElasticity::testCalcTotalStrain1D : OK
> pylith::feassemble::TestIntegratorElasticity::testCalcTotalStrain2D : OK
> pylith::feassemble::TestIntegratorElasticity::testCalcTotalStrain3D : OK
> pylith::feassemble::TestElasticityExplicit::testConstructor : OK
> pylith::feassemble::TestElasticityExplicit::testTimeStep : OK
> pylith::feassemble::TestElasticityExplicit::testMaterial : OK
> pylith::feassemble::TestElasticityExplicit::testNeedNewJacobian : OK
> pylith::feassemble::TestElasticityExplicit::testUseSolnIncr : OK
> pylith::feassemble::TestElasticityExplicit1DLinear::testInitialize : OK
> pylith::feassemble::TestElasticityExplicit1DLinear::testIntegrateResidual :
> OK
> pylith::feassemble::TestElasticityExplicit1DLinear::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicit1DLinear::testIntegrateJacobian :
> OK
> pylith::feassemble::TestElasticityExplicit1DLinear::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicit1DLinear::testUpdateStateVars : OK
> pylith::feassemble::TestElasticityExplicit1DLinear::testStableTimeStep : OK
> pylith::feassemble::TestElasticityExplicit1DQuadratic::testInitialize : OK
> pylith::feassemble::TestElasticityExplicit1DQuadratic::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityExplicit1DQuadratic::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicit1DQuadratic::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityExplicit1DQuadratic::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicit1DQuadratic::testUpdateStateVars :
> OK
> pylith::feassemble::TestElasticityExplicit1DQuadratic::testStableTimeStep :
> OK
> pylith::feassemble::TestElasticityExplicit2DLinear::testInitialize : OK
> pylith::feassemble::TestElasticityExplicit2DLinear::testIntegrateResidual :
> OK
> pylith::feassemble::TestElasticityExplicit2DLinear::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicit2DLinear::testIntegrateJacobian :
> OK
> pylith::feassemble::TestElasticityExplicit2DLinear::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicit2DLinear::testUpdateStateVars : OK
> pylith::feassemble::TestElasticityExplicit2DLinear::testStableTimeStep : OK
> pylith::feassemble::TestElasticityExplicit2DQuadratic::testInitialize : OK
> pylith::feassemble::TestElasticityExplicit2DQuadratic::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityExplicit2DQuadratic::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicit2DQuadratic::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityExplicit2DQuadratic::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicit2DQuadratic::testUpdateStateVars :
> OK
> pylith::feassemble::TestElasticityExplicit2DQuadratic::testStableTimeStep :
> OK
> pylith::feassemble::TestElasticityExplicit3DLinear::testInitialize : OK
> pylith::feassemble::TestElasticityExplicit3DLinear::testIntegrateResidual :
> OK
> pylith::feassemble::TestElasticityExplicit3DLinear::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicit3DLinear::testIntegrateJacobian :
> OK
> pylith::feassemble::TestElasticityExplicit3DLinear::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicit3DLinear::testUpdateStateVars : OK
> pylith::feassemble::TestElasticityExplicit3DLinear::testStableTimeStep : OK
> pylith::feassemble::TestElasticityExplicit3DQuadratic::testInitialize : OK
> pylith::feassemble::TestElasticityExplicit3DQuadratic::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityExplicit3DQuadratic::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicit3DQuadratic::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityExplicit3DQuadratic::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicit3DQuadratic::testUpdateStateVars :
> OK
> pylith::feassemble::TestElasticityExplicit3DQuadratic::testStableTimeStep :
> OK
> pylith::feassemble::TestElasticityExplicitGrav1DLinear::testInitialize : OK
> pylith::feassemble::TestElasticityExplicitGrav1DLinear::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityExplicitGrav1DLinear::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav1DLinear::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityExplicitGrav1DLinear::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav1DLinear::testUpdateStateVars
> : OK
> pylith::feassemble::TestElasticityExplicitGrav1DQuadratic::testInitialize :
> OK
> pylith::feassemble::TestElasticityExplicitGrav1DQuadratic::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityExplicitGrav1DQuadratic::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav1DQuadratic::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityExplicitGrav1DQuadratic::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav1DQuadratic::testUpdateStateVars
> : OK
> pylith::feassemble::TestElasticityExplicitGrav2DLinear::testInitialize : OK
> pylith::feassemble::TestElasticityExplicitGrav2DLinear::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityExplicitGrav2DLinear::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav2DLinear::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityExplicitGrav2DLinear::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav2DLinear::testUpdateStateVars
> : OK
> pylith::feassemble::TestElasticityExplicitGrav2DQuadratic::testInitialize :
> OK
> pylith::feassemble::TestElasticityExplicitGrav2DQuadratic::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityExplicitGrav2DQuadratic::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav2DQuadratic::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityExplicitGrav2DQuadratic::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav2DQuadratic::testUpdateStateVars
> : OK
> pylith::feassemble::TestElasticityExplicitGrav3DLinear::testInitialize : OK
> pylith::feassemble::TestElasticityExplicitGrav3DLinear::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityExplicitGrav3DLinear::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav3DLinear::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityExplicitGrav3DLinear::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav3DLinear::testUpdateStateVars
> : OK
> pylith::feassemble::TestElasticityExplicitGrav3DQuadratic::testInitialize :
> OK
> pylith::feassemble::TestElasticityExplicitGrav3DQuadratic::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityExplicitGrav3DQuadratic::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav3DQuadratic::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityExplicitGrav3DQuadratic::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicitGrav3DQuadratic::testUpdateStateVars
> : OK
> pylith::feassemble::TestElasticityExplicitTri3::testConstructor : OK
> pylith::feassemble::TestElasticityExplicitTri3::testTimeStep : OK
> pylith::feassemble::TestElasticityExplicitTri3::testMaterial : OK
> pylith::feassemble::TestElasticityExplicitTri3::testNeedNewJacobian : OK
> pylith::feassemble::TestElasticityExplicitTri3::testUseSolnIncr : OK
> pylith::feassemble::TestElasticityExplicitTri3::testInitialize : OK
> pylith::feassemble::TestElasticityExplicitTri3::testIntegrateResidual : OK
> pylith::feassemble::TestElasticityExplicitTri3::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicitTri3::testIntegrateJacobian : OK
> pylith::feassemble::TestElasticityExplicitTri3::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicitTri3::testUpdateStateVars : OK
> pylith::feassemble::TestElasticityExplicitTri3::testStableTimeStep : OK
> pylith::feassemble::TestElasticityExplicitTet4::testConstructor : OK
> pylith::feassemble::TestElasticityExplicitTet4::testTimeStep : OK
> pylith::feassemble::TestElasticityExplicitTet4::testMaterial : OK
> pylith::feassemble::TestElasticityExplicitTet4::testNeedNewJacobian : OK
> pylith::feassemble::TestElasticityExplicitTet4::testUseSolnIncr : OK
> pylith::feassemble::TestElasticityExplicitTet4::testInitialize : OK
> pylith::feassemble::TestElasticityExplicitTet4::testIntegrateResidual : OK
> pylith::feassemble::TestElasticityExplicitTet4::testIntegrateResidualLumped
> : OK
> pylith::feassemble::TestElasticityExplicitTet4::testIntegrateJacobian : OK
> pylith::feassemble::TestElasticityExplicitTet4::testIntegrateJacobianLumped
> : OK
> pylith::feassemble::TestElasticityExplicitTet4::testUpdateStateVars : OK
> pylith::feassemble::TestElasticityExplicitTet4::testStableTimeStep : OK
> pylith::feassemble::TestElasticityImplicit::testConstructor : OK
> pylith::feassemble::TestElasticityImplicit::testTimeStep : OK
> pylith::feassemble::TestElasticityImplicit::testMaterial : OK
> pylith::feassemble::TestElasticityImplicit::testNeedNewJacobian : OK
> pylith::feassemble::TestElasticityImplicit::testUseSolnIncr : OK
> pylith::feassemble::TestElasticityImplicit1DLinear::testInitialize : OK
> pylith::feassemble::TestElasticityImplicit1DLinear::testIntegrateResidual :
> OK
> pylith::feassemble::TestElasticityImplicit1DLinear::testIntegrateJacobian :
> OK
> pylith::feassemble::TestElasticityImplicit1DLinear::testUpdateStateVars : OK
> pylith::feassemble::TestElasticityImplicit1DLinear::testStableTimeStep : OK
> pylith::feassemble::TestElasticityImplicit1DQuadratic::testInitialize : OK
> pylith::feassemble::TestElasticityImplicit1DQuadratic::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityImplicit1DQuadratic::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityImplicit1DQuadratic::testUpdateStateVars :
> OK
> pylith::feassemble::TestElasticityImplicit1DQuadratic::testStableTimeStep :
> OK
> pylith::feassemble::TestElasticityImplicit2DLinear::testInitialize : OK
> pylith::feassemble::TestElasticityImplicit2DLinear::testIntegrateResidual :
> OK
> pylith::feassemble::TestElasticityImplicit2DLinear::testIntegrateJacobian :
> OK
> pylith::feassemble::TestElasticityImplicit2DLinear::testUpdateStateVars : OK
> pylith::feassemble::TestElasticityImplicit2DLinear::testStableTimeStep : OK
> pylith::feassemble::TestElasticityImplicit2DQuadratic::testInitialize : OK
> pylith::feassemble::TestElasticityImplicit2DQuadratic::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityImplicit2DQuadratic::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityImplicit2DQuadratic::testUpdateStateVars :
> OK
> pylith::feassemble::TestElasticityImplicit2DQuadratic::testStableTimeStep :
> OK
> pylith::feassemble::TestElasticityImplicit3DLinear::testInitialize : OK
> pylith::feassemble::TestElasticityImplicit3DLinear::testIntegrateResidual :
> OK
> pylith::feassemble::TestElasticityImplicit3DLinear::testIntegrateJacobian :
> OK
> pylith::feassemble::TestElasticityImplicit3DLinear::testUpdateStateVars : OK
> pylith::feassemble::TestElasticityImplicit3DLinear::testStableTimeStep : OK
> pylith::feassemble::TestElasticityImplicit3DQuadratic::testInitialize : OK
> pylith::feassemble::TestElasticityImplicit3DQuadratic::testIntegrateResidual
> : OK
> pylith::feassemble::TestElasticityImplicit3DQuadratic::testIntegrateJacobian
> : OK
> pylith::feassemble::TestElasticityImplicit3DQuadratic::testUpdateStateVars :
> OK
> pylith::feassemble::TestElasticityImplicit3DQuadratic::testStableTimeStep :
> OK
> pylith::feassemble::TestElasticityImplicitGrav1DLinear::testInitialize : OK
> pylith::feassemble::TestElasticityImplicitGrav1DLinear::testIntegrateResidual[0]PETSC
> ERROR:
> ------------------------------------------------------------------------
> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation,
> probably memory access out of range
> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger
> [0]PETSC ERROR: or see
> http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html#valgrind[0]PETSCERROR:
> or try
> http://valgrind.org on GNU/linux and Apple Mac OS X to find memory
> corruption errors
> [0]PETSC ERROR: configure using --with-debugging=yes, recompile, link, and
> run
> [0]PETSC ERROR: to get more information on the crash.
> [0]PETSC ERROR: --------------------- Error Message
> ------------------------------------
> [0]PETSC ERROR: Signal received!
> [0]PETSC ERROR:
> ------------------------------------------------------------------------
> [0]PETSC ERROR: Petsc Development HG revision:
> cf735cc08903cfb8eb748b1c44ea97d1cb4d7b9b  HG Date: Mon Mar 28 12:42:26 2011
> -0500
> [0]PETSC ERROR: See docs/changes/index.html for recent updates.
> [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
> [0]PETSC ERROR: See docs/index.html for manual pages.
> [0]PETSC ERROR:
> ------------------------------------------------------------------------
> [0]PETSC ERROR:
> /home/jeffremt/tools/cig/v1.5-stable/unittests/libtests/feassemble/.libs/lt-testfeassemble
> on a linux_gcc named jokull.gps.caltech.edu by jeffremt Tue Mar 29 12:03:24
> 2011
> [0]PETSC ERROR: Libraries linked from
> /home/jeffremt/tools/petsc-dev/linux_gcc-4.1.1_64_opt/lib
> [0]PETSC ERROR: Configure run at Tue Mar 29 10:37:49 2011
> [0]PETSC ERROR: Configure options --PETSC_ARCH=linux_gcc-4.1.1_64_opt
> --with-debugging=0 --with-clanguage=cxx --with-mpi-compilers=0
> --with-gnu-compilers=1 --with-shared-libraries=1 --with-dynamic-loading=1
> --with-64-bit-points=1 --with-large-file-io=1 --cc=gcc --cxx=g++
> --fc=gfortran --with-mpi-dir=/home/jeffremt/tools/mpich-1.2.1/gcc-4.1.1_64
> --with-mpi-shared=0 --with-lgrind=0 --with-c2html=0 --with-chaco=1
> --download-chaco=1 --with-parmetis=1
> --with-parmetis-dir=~/tools/ParMetis-3.1.1/gcc-4.1.1_64
> --with-f-blas-lapack=1 --download-f-blas-lapack=1 --with-sieve=1
> --with-boost=1 --download-boost=1 --download-fiat=1
> --with-scientificpython=1
> --with-scientificpython-dir=/home/jeffremt/tools/petsc-dev/linux_gcc-4.1.1_64_opt
> [0]PETSC ERROR:
> ------------------------------------------------------------------------
> [0]PETSC ERROR: User provided function() line 0 in unknown directory unknown
> file
> application called MPI_Abort(MPI_COMM_WORLD, 59) - process 0
> FAIL: testfeassemble
> ==========================================
> 1 of 1 tests failed
> Please report to cig-short at geodynamics.org
> ==========================================
> make[5]: *** [check-TESTS] Error 1
> make[5]: Leaving directory
> `/home/jeffremt/tools/cig/v1.5-stable/unittests/libtests/feassemble'
> make[4]: *** [check-am] Error 2
> make[4]: Leaving directory
> `/home/jeffremt/tools/cig/v1.5-stable/unittests/libtests/feassemble'
> make[3]: *** [check-recursive] Error 1
> make[3]: Leaving directory
> `/home/jeffremt/tools/cig/v1.5-stable/unittests/libtests/feassemble'
> make[2]: *** [check-recursive] Error 1
> make[2]: Leaving directory
> `/home/jeffremt/tools/cig/v1.5-stable/unittests/libtests'
> make[1]: *** [check-recursive] Error 1
> make[1]: Leaving directory `/home/jeffremt/tools/cig/v1.5-stable/unittests'
> make: *** [check-recursive] Error 1
>
>
>
>
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