[CIG-SHORT] dynamic benchmark problem

Roby Douilly rdouilly at purdue.edu
Mon Apr 15 10:32:29 PDT 2013


Brad, 

I run it with this command: 

pylith tet4.cfg tpv15.cfg tpv15_tet4_100.cfg


Roby


On Apr 15, 2013, at 1:28 PM, Brad Aagaard <baagaard at usgs.gov> wrote:

> Roby,
> 
> Please give the *exact* command line arguments you are using. You could 
> be leaving out a .cfg file or using outdated files.
> 
> Brad
> 
> On 4/15/13 10:24 AM, Roby Douilly wrote:
>> Hello,
>> 
>> I am trying to run the scec dynamic benchmark tpv15 for 100m. Each time
>> I tried to run it, I got the error message below.
>> There is no error message when I run it for 200m. Is there a way to
>> avoid this error.
>> 
>> Thanks,
>> 
>> Roby
>> 
>> 
>> 
>> 
>> RuntimeError: Determinant of Jacobian (9.85786e-07) for cell 1668 is
>> smaller than minimum permissible value (1e-06)!
>> 
>> --------------------------------------------------------------------------
>> MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD
>> with errorcode -1.
>> 
>> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
>> You may or may not see output from other processes, depending on
>> exactly when Open MPI kills them.
>> --------------------------------------------------------------------------
>> --------------------------------------------------------------------------
>> mpirun has exited due to process rank 0 with PID 17553 on
>> node chilmark.eas.purdue.edu <http://chilmark.eas.purdue.edu> exiting
>> without calling "finalize". This may
>> have caused other processes in the application to be
>> terminated by signals sent by mpirun (as reported here).
>> --------------------------------------------------------------------------
>> /opt/pylith/bin/nemesis: mpirun: exit 255
>> /opt/pylith/bin/pylith: /opt/pylith/bin/nemesis: exit 1
>> 
>> 
>> 
>> 
>> ---------------------------------------------------------------------------------
>> Roby Douilly
>> Graduate Student
>> Department of Earth, Atmospheric, and Planetary Sciences
>> Purdue University
>> 550 Stadium Mall Dr.
>> West Lafayette, IN 47907-2051
>> rdouilly at purdue.edu <mailto:rdouilly at purdue.edu>
>> 
>> 
>> 
>> 
>> 
>> 
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>> 
> 
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Roby

---------------------------------------------------------------------------------
Roby Douilly
Graduate Student 
Department of Earth, Atmospheric, and Planetary Sciences
Purdue University
550 Stadium Mall Dr.
West Lafayette, IN 47907-2051
rdouilly at purdue.edu




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