[CIG-SHORT] pylith-2.0.3 pytests/meshio test fails

[Brad Aagaard]

Birendra,

I found one very small memory issue that Matt has fixed. It could be 
responsible for the memory leak you are seeing in the pytests/meshio 
test, but I doubt it. I noticed from your config.log that you are using 
gcc 4.6.3 and Python 2.7.2.

The current gcc 4.6 version is 4.6.4 and the current Python 2 version is 
2.7.6. The patches for these later versions could be fixing this issue.

Have you tried running a simulation? Do you get any errors?

Brad


On 08/21/2014 01:30 PM, Birendra jha wrote:
> Here it is.
>
> Thanks
> Birendra
> --------------------------------------------
> On Thu, 8/21/14, Brad Aagaard <baagaard at usgs.gov> wrote:
>
>   Subject: Re: [CIG-SHORT] pylith-2.0 and 2.1 installer
>   To: "Birendra jha" <bjha7333 at yahoo.com>
>   Cc: cig-short at geodynamics.org
>   Date: Thursday, August 21, 2014, 3:28 PM
>
>   Birendra,
>
>   The tests all pass but there
>   is a memory leak. I don't get this on any
>   of the machines where I have built PyLith.
>   Please send the config.log
>   from the
>   pylith-build directory.
>
>   Brad
>
>
>   On
>   08/21/2014 11:18 AM, Birendra jha wrote:
>   > Here it is.
>   >
>   > thanks
>   > Birendra
>   >
>   >
>   --------------------------------------------
>   > On Thu, 8/21/14, Brad Aagaard <baagaard at usgs.gov>
>   wrote:
>   >
>   >   Subject: Re: [CIG-SHORT]
>   pylith-2.0 and 2.1 installer
>   >   To: "Birendra jha"
>   <bjha7333 at yahoo.com>
>   >   Cc: cig-short at geodynamics.org
>   >   Date: Thursday, August 21,
>   2014, 2:01 PM
>   >
>   >   Birendra,
>   >
>   >   The
>   test-suite.log file does
>   >   not appear to have all of the
>   test output.
>   >   Please send
>   all of the test*.log files
>   >   (testcubit.py.log,
>   >   testhdf5.py.log,
>   >   testmeshio.py.log, and
>   test-suite.log).
>   >
>   >   Thanks,
>   >   Brad
>   >
>   >
>   >   On
>   08/21/2014 10:56 AM,
>   >   Birendra jha wrote:
>   >   > Hi Brad
>   >   >
>   >   > I am trying to
>   >   install pylith-2.0.3 from the
>   source. One of the tests is
>   >   failing. Please see the
>   attached file.
>   >   >
>   >   > Thanks
>   >   > Birendra
>   >   >
>   >   --------------------------------------------
>   >   > On Wed, 8/20/14, Brad
>   Aagaard <baagaard at usgs.gov>
>   >   wrote:
>   >   >
>   >   >   Subject:
>   Re: [CIG-SHORT]
>   >   pylith-2.0
>   and 2.1 installer
>   >   >   To: bjha7333 at yahoo.com
>   >   >   Date:
>   Wednesday, August 20,
>   >   2014, 1:29 PM
>   >   >
>   >   >   Birendra,
>   >   >
>   >   >   I
>   >   finished updating the
>   >   >   binaries,
>   installer, etc and
>   >   created
>   a v2.0.3
>   >   >   release
>   >   so that they are all the
>   same
>   >   >   version.
>   >   >
>   >   >   Brad
>   >   >
>   >   >
>   >   >   On
>   08/18/2014 01:47 PM,
>   >   >   Birendra
>   jha wrote:
>   >   >   > Hi
>   >   >   >
>   >   >   > I am
>   using the
>   >   >   pylith-installer-2.0.0-0.tgz[2014-06-05].
>   >   The
>   >   >   pylith-2.0.0/libsrc/pylith/Makefile.am
>   >   file has zero bytes.
>   >   >   Is
>   >   that correct? Can I replace
>   this with pylith-1.8.0's
>   >   >   Makefile.am?
>   >   >   >
>   >   >   >
>   Also,
>   >   >   how do I
>   install
>   >   pylith-2.0.1?
>   >   >   >
>   >   >   pylith-2.0.1.tgz
>   is not an
>   >   installer.
>   Should I just replace
>   >   >   the
>   contents of pylith-2.0.0
>   >   with the contents of
>   unzipped
>   >   >   pylith-2.0.1.tgz?
>   >   >   > What
>   is
>   >   >   petsc-pylith-2.0.1.tgz?
>   >   How/when do I use it?
>   >   >   >
>   >   >   > Thanks
>   and regards
>   >   >   >
>   Birendra
>   >   >   >
>   >   >   _______________________________________________
>   >   >   >
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>   >
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