[CIG-SHORT] Error when compiling Pylith on cluster

Matthew Knepley knepley at mcs.anl.gov
Sat Dec 13 07:27:35 PST 2014


On Sat, Dec 13, 2014 at 4:19 AM, Xiao Ma <xiaoma5 at illinois.edu> wrote:
>
> Hi ,
> I have successfully build Pyilith from source on a cluster, however when I
> try to submit it to the cluster, it gives the following error
>

These appear to be cut and paste errors in your .cfg file. It gives you the
line numbers, and all are misspelled:

  DataWriterHDF5SubSubMesh --> DataWriterHDF5SubMesh

  CellFilterAvgMesh --> CellFilterAvg

  DataWriterHDF5Mesh --> DataWriterHDF5

     Matt


> ----------------------------------------
>  >> ./pylithapp.cfg:223:
>  -- pyre.inventory(error)
>  -- timedependent.interfaces.faultcohesivedyn.outputfaultdyn.writer <-
> 'pylith.meshio.DataWriterHDF5SubSubMesh'
>  -- could not bind facility 'writer': component
> 'pylith.meshio.DataWriterHDF5SubSubMesh' not found
>  >> ./pylithapp.cfg:228:
>  -- pyre.inventory(error)
>  --
> timedependent.materials.elasticplanestrain.outputmatelastic.cell_filter <-
> 'pylith.meshio.CellFilterAvgMesh'
>  -- could not bind facility 'cell_filter': component
> 'pylith.meshio.CellFilterAvgMesh' not found
>  >> ./pylithapp.cfg:218:
>  -- pyre.inventory(error)
>  -- timedependent.explicit.output.outputsolnpoints.writer <-
> 'pylith.meshio.DataWriterHDF5Mesh'
>  -- could not bind facility 'writer': component
> 'pylith.meshio.DataWriterHDF5Mesh' not found
> pylithapp: configuration error(s)
> ----------------------------------------
> Can you help me solve this problem ?
> Thanks,
> Xiao
>
> --
>
> -------------------------------------------------------------------------------------
> *Xiao Ma*
> Graduate Research Assistant
> MS program in Structural Engineering
> University of Illinois at Urbana-Champaign
> E-mail: *xiaoma5 at illinois.edu <xiaoma5 at illinois.edu>*
>
> --------------------------------------------------------------------------------------
>
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