[CIG-SHORT] Error when compiling Pylith on cluster

Brad Aagaard baagaard at usgs.gov
Sat Dec 13 15:58:15 PST 2014


Xiao,

See the README in the top-level PyLith directory regarding migration 
from 1.9 to 2.0.

Regards,
Brad


On 12/13/14, 7:27 AM, Matthew Knepley wrote:
> On Sat, Dec 13, 2014 at 4:19 AM, Xiao Ma <xiaoma5 at illinois.edu
> <mailto:xiaoma5 at illinois.edu>> wrote:
>
>     Hi ,
>     I have successfully build Pyilith from source on a cluster, however
>     when I try to submit it to the cluster, it gives the following error
>
>
> These appear to be cut and paste errors in your .cfg file. It gives you
> the line numbers, and all are misspelled:
>
>    DataWriterHDF5SubSubMesh --> DataWriterHDF5SubMesh
>
>    CellFilterAvgMesh --> CellFilterAvg
>
>    DataWriterHDF5Mesh --> DataWriterHDF5
>
>       Matt
>
>     ----------------------------------------
>       >> ./pylithapp.cfg:223:
>       -- pyre.inventory(error)
>       -- timedependent.interfaces.faultcohesivedyn.outputfaultdyn.writer
>     <- 'pylith.meshio.DataWriterHDF5SubSubMesh'
>       -- could not bind facility 'writer': component
>     'pylith.meshio.DataWriterHDF5SubSubMesh' not found
>       >> ./pylithapp.cfg:228:
>       -- pyre.inventory(error)
>       --
>     timedependent.materials.elasticplanestrain.outputmatelastic.cell_filter
>     <- 'pylith.meshio.CellFilterAvgMesh'
>       -- could not bind facility 'cell_filter': component
>     'pylith.meshio.CellFilterAvgMesh' not found
>       >> ./pylithapp.cfg:218:
>       -- pyre.inventory(error)
>       -- timedependent.explicit.output.outputsolnpoints.writer <-
>     'pylith.meshio.DataWriterHDF5Mesh'
>       -- could not bind facility 'writer': component
>     'pylith.meshio.DataWriterHDF5Mesh' not found
>     pylithapp: configuration error(s)
>     ----------------------------------------
>     Can you help me solve this problem ?
>     Thanks,
>     Xiao
>
>     --
>     -------------------------------------------------------------------------------------
>     *Xiao Ma*
>     Graduate Research Assistant
>     MS program in Structural Engineering
>     University of Illinois at Urbana-Champaign
>     E-mail: _xiaoma5 at illinois.edu <mailto:xiaoma5 at illinois.edu>_
>     --------------------------------------------------------------------------------------
>
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>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which
> their experiments lead.
> -- Norbert Wiener
>
>
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