[CIG-SHORT] Running on cluster

[Matthew Knepley]

On Wed, Jul 30, 2014 at 1:33 PM, Xiao Ma <xiaoma5 at illinois.edu> wrote:

> Hi,
> I am encountering some difficulties when the building pylith from source
> on a cluster, I following the steps in "Install", however after I use the
> "make" , the pylith still not successfully  installed. And one more
> question is : what if I want to run the simulation on only one node on the
> cluster? is that possible? But first thing I have to get rid of this error
>

The pylith installer can give PETSc specific configure options. You should
tell it to use --with-fc=0. Note that
for this to work, you must have BLAS/LAPACK in default locations. It might
be easier just to tell your admin
people to fix the Fortran they have installed.

  Thanks,

     Matt


>
> *************************************************************************************
>  "ImportError: /usr/lib64/libgfortran.so.3: version `GFORTRAN_1.4' not
> found (required by
> /home/xiaoma5/project-cse/pylith-1.9.0-linux-x86_64/lib/libpetsc.so)"
>
> ************************************************************************************
> So the problem is the incompatibility with the Fortran compier on the
> cluster.
> I once was told the building PETSC without FORTRAN can solve this using
> 'with-fc=0' in configure, can you elaborate this ? Is this possible that I
> just use one node running on cluster using PETCS without FORTRAN?
> Thank you
> Xiao
>
> --
>
> -------------------------------------------------------------------------------------
> *Xiao Ma*
> Graduate Research Assistant
> MS program in Structural Engineering
> University of Illinois at Urbana-Champaign
> E-mail: *xiaoma5 at illinois.edu <xiaoma5 at illinois.edu>*
>
> --------------------------------------------------------------------------------------
>
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-- 
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which their
experiments lead.
-- Norbert Wiener
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