[CIG-SHORT] pylith error
Birendra jha
bjha7333 at yahoo.com
Thu Aug 6 09:39:52 PDT 2015
make distclean in pylith-build removed Makefile. Do I need to run configure of the installer again? But that will install everything, like cppunit, hdf etc.
Thanks
Birendra
--------------------------------------------
On Thu, 8/6/15, Brad Aagaard <baagaard at usgs.gov> wrote:
Subject: Re: [CIG-SHORT] pylith error
To: cig-short at geodynamics.org
Date: Thursday, August 6, 2015, 11:56 AM
Birendra,
Your build directory appears
to have gotten corrupted with some
generated files. Try running "make
distclean" and rebuilding.
Regards,
Brad
On 08/06/2015
08:51 AM, Birendra jha wrote:
> Brad
>
> Yes, you were right.
I had qsub commands in the cfg file when the system has a
different queuing system.
>
> I have a different question now. I am
getting the following error during make install in
pylith-build folder:
>
>
----------------------------------------------------------------------
> /bin/mkdir -p
'/home/bjha/pylith-1.9.0/lib/python2.7/site-packages/pylith/bc'
> /usr/bin/install -c -m 644
../../../pylith-1.9.0/modulesrc/bc/bc.py
'/home/bjha/pylith-1.9.0/lib/python2.7/site-packages/pylith/bc'
>
../../../pylith-1.9.0/./aux-config/py-compile: Missing
argument to --destdir.
> make[3]: ***
[install-subpkgpyexecPYTHON] Error 1
>
make[3]: Leaving directory
`/home/bjha/build/pylith-1.9.0/pylith-build/modulesrc/bc'
>
> What is the meaning
of this and how can I fix it? I attach the
pylith-build/config.log file.
>
> Thanks
> Birendra
>
>
--------------------------------------------
> On Wed, 8/5/15, Brad Aagaard <baagaard at usgs.gov>
wrote:
>
> Subject: Re: [CIG-SHORT]
pylith error
> To: cig-short at geodynamics.org
> Date: Wednesday, August 5,
2015, 4:02 PM
>
> Birendra,
>
> Only the
last line (qsub exit
> 32)
looks like an error. The lines above
> that are just warnings (note
the UserWarning).
> The
information about the
> qsub
error must
> be
elsewhere.
>
> Regards,
> Brad
>
>
> On
> 08/05/2015 12:47 PM, Birendra
jha wrote:
> > Hi Brad
> >
> > I am getting the
following error when
> trying to run pylith on a
computer where I just installed
> pylith-1.8.0. If you
remember, you helped in getting the
> correct web addresses in the
pylith 1.8.0 installer.
> >
> > I have never seen
> this error and don't know
what to do:
> >
> >
> /a06agi25/pylith/lib/python2.7/site-packages/pythia-0.8.1.15-py2.7.egg/pyre/inventory/odb/Curator.py:200:
> UserWarning: Module
pkg_resources was already imported from
> /a06agi25/pylith/lib/python2.7/site-packages/setuptools-0.6c11-py2.7.egg/pkg_resources.py,
> but
> /a06agi25/pylith/lib/python2.7/site-packages/merlin-1.8.egg
> is being added to sys.path
> > from
> pkg_resources import
resource_listdir, resource_isdir,
> resource_exists,
resource_filename, Requirement
> >
> /a06agi25/pylith/lib/python2.7/site-packages/pythia-0.8.1.15-py2.7.egg/pyre/inventory/odb/Curator.py:200:
> UserWarning: Module site was
already imported from
> /developers/devenv/prod/opt/tools/python/2.7.5/gnu--4.7.2/lib/python2.7/site.pyc,
> but
> /a06agi25/pylith/lib/python2.7/site-packages/merlin-1.8.egg
> is being added to sys.path
> > from
> pkg_resources import
resource_listdir, resource_isdir,
> resource_exists,
resource_filename, Requirement
> >
/a06agi25/pylith/bin/pylith: qsub: exit
> 32
> >
> > Thanks
> > Birendra
> >
> _______________________________________________
> > CIG-SHORT mailing
list
> > CIG-SHORT at geodynamics.org
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> >
>
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