[CIG-SHORT] PyLith configure script cannot find PETSc

[Romain Jolivet]

I don’t have  $PETSC_DIR/$PETSC_ARCH/lib/petsc-conf 
It is the one being checked for in configure.
What I have is only $PETSC_DIR/lib/petsc-conf
That is both on our linux cluster and on my iMac.

R


Romain Jolivet
Cambridge, UK
jolivetinsar at gmail.com
UK: +44 7596 703 148
France: +33 6 52 91 76 39
USA: +1 (626) 560 6356

On 13 Feb 2015, at 15:28, Matthew Knepley <knepley at mcs.anl.gov> wrote:

> On Fri, Feb 13, 2015 at 9:22 AM, Romain Jolivet <jolivetinsar at gmail.com> wrote:
> I got it to work, but not with the m4 file you provided.
> In your file, you test for $PETSC_DIR/$PETSC_ARCH/lib/petsc-conf
> While the architecture I have is $PETSC_DIR/lib/petsc-conf
> The variable PETSC_ARCH is not used in the destination directory when I install petsc…
> Is that normal?
> 
> Both of these directories exist. What is being checked for?
> 
>   Thanks,
> 
>      Matt
>  
> R
>  
> Romain Jolivet
> Cambridge, UK
> jolivetinsar at gmail.com
> UK: +44 7596 703 148
> France: +33 6 52 91 76 39
> USA: +1 (626) 560 6356
> 
> On 13 Feb 2015, at 14:54, Brad Aagaard <baagaard at usgs.gov> wrote:
> 
>> Romain and Matt,
>> 
>> This is already fixed. Romain needs to pull the m4 dir or reclone pylith.
>> 
>> In the top level pylith dir,
>> 
>> cd m4
>> git pull origin master
>> 
>> Brad
>> 
>> 
>> 
>> On Feb 13, 2015, at 3:54 AM, Romain Jolivet <jolivetinsar at gmail.com> wrote:
>> 
>>> Oh, sorry, here it is.
>>> R
>>> 
>>> <cit_petsc.m4>
>>> 
>>> Romain Jolivet
>>> Cambridge, UK
>>> jolivetinsar at gmail.com
>>> UK: +44 7596 703 148
>>> France: +33 6 52 91 76 39
>>> USA: +1 (626) 560 6356
>>> 
>>> On 13 Feb 2015, at 11:52, Matthew Knepley <knepley at mcs.anl.gov> wrote:
>>> 
>>>> On Fri, Feb 13, 2015 at 5:45 AM, Romain Jolivet <jolivetinsar at gmail.com> wrote:
>>>> Hello,
>>>> 
>>>> After compiling manually petsc from the git repository, I noticed the architecture of the file directories that are copied into the —prefix argument are different from why I was used to.
>>>> As a consequence, the configure in pylith cannot find the petsc libraries.
>>>> I looked into the m4/cit_petsc.m4 file used by autoreconf, and I do not see the case for the architecture I have.
>>>> 
>>>> I could modify it to adapt to my system, but, there should be a better way.
>>>> Attached is the modified cit_petsc.m4 I modified to compile pylith.
>>>> Any suggestions?
>>>> 
>>>> There is nothing attached. The PyLith master branch tracks PETSc knepley/pylith, so all fixes
>>>> should be there.
>>>> 
>>>>   Thanks,
>>>> 
>>>>     Matt
>>>>  
>>>> 
>>>> R
>>>> 
>>>> 
>>>> —————————————————————————————————————
>>>> —————————————————————————————————————
>>>> Romain Jolivet
>>>> Postdoctoral Fellow
>>>> 
>>>> University of Cambridge
>>>> Department of Earth Sciences
>>>> Bullard Labs
>>>> Madingley Rise
>>>> Madingley Road
>>>> Cambridge CB3 0EZ
>>>> United Kingdom
>>>> 
>>>> email: rpj29 at cam.ac.uk
>>>> Phone: +44 1223 748 938
>>>> Mobile: +44 7596 703 148
>>>> 
>>>> France: +33 6 52 91 76 39
>>>> US: +1 (626) 560 6356
>>>> —————————————————————————————————————
>>>> —————————————————————————————————————
>>>> 
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>>>> 
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>>>> -- Norbert Wiener
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> 
> -- 
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> -- Norbert Wiener
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