[CIG-SHORT] PyLith configure script cannot find PETSc

[Matthew Knepley]

On Fri, Feb 13, 2015 at 9:34 AM, Romain Jolivet <jolivetinsar at gmail.com>
wrote:

> I don’t have  $PETSC_DIR/$PETSC_ARCH/lib/petsc-conf
> It is the one being checked for in configure.
> What I have is only $PETSC_DIR/lib/petsc-conf
> That is both on our linux cluster and on my iMac.
>

The build process creates them. If they are not there, PETSc was not built.
The
configure log has a record of created files. Can you send it for the
configuration
that you cannot find this directory for?

  Matt


> R
>
>
> Romain Jolivet
> Cambridge, UK
> jolivetinsar at gmail.com
> UK: +44 7596 703 148
> France: +33 6 52 91 76 39
> USA: +1 (626) 560 6356
>
> On 13 Feb 2015, at 15:28, Matthew Knepley <knepley at mcs.anl.gov> wrote:
>
> On Fri, Feb 13, 2015 at 9:22 AM, Romain Jolivet <jolivetinsar at gmail.com>
> wrote:
>
>> I got it to work, but not with the m4 file you provided.
>> In your file, you test for $PETSC_DIR/$PETSC_ARCH/lib/petsc-conf
>>
> While the architecture I have is $PETSC_DIR/lib/petsc-conf
>> The variable PETSC_ARCH is not used in the destination directory when I
>> install petsc…
>> Is that normal?
>>
>
> Both of these directories exist. What is being checked for?
>
>   Thanks,
>
>      Matt
>
>
>> R
>>
>> Romain Jolivet
>> Cambridge, UK
>> jolivetinsar at gmail.com
>> UK: +44 7596 703 148
>> France: +33 6 52 91 76 39
>> USA: +1 (626) 560 6356
>>
>> On 13 Feb 2015, at 14:54, Brad Aagaard <baagaard at usgs.gov> wrote:
>>
>> Romain and Matt,
>>
>> This is already fixed. Romain needs to pull the m4 dir or reclone pylith.
>>
>> In the top level pylith dir,
>>
>> cd m4
>> git pull origin master
>>
>> Brad
>>
>>
>>
>> On Feb 13, 2015, at 3:54 AM, Romain Jolivet <jolivetinsar at gmail.com>
>> wrote:
>>
>> Oh, sorry, here it is.
>> R
>>
>> <cit_petsc.m4>
>>
>>
>> Romain Jolivet
>> Cambridge, UK
>> jolivetinsar at gmail.com
>> UK: +44 7596 703 148
>> France: +33 6 52 91 76 39
>> USA: +1 (626) 560 6356
>>
>> On 13 Feb 2015, at 11:52, Matthew Knepley <knepley at mcs.anl.gov> wrote:
>>
>> On Fri, Feb 13, 2015 at 5:45 AM, Romain Jolivet <jolivetinsar at gmail.com>
>> wrote:
>>
>>> Hello,
>>>
>>> After compiling manually petsc from the git repository, I noticed the
>>> architecture of the file directories that are copied into the —prefix
>>> argument are different from why I was used to.
>>> As a consequence, the configure in pylith cannot find the petsc
>>> libraries.
>>> I looked into the m4/cit_petsc.m4 file used by autoreconf, and I do not
>>> see the case for the architecture I have.
>>>
>>> I could modify it to adapt to my system, but, there should be a better
>>> way.
>>> Attached is the modified cit_petsc.m4 I modified to compile pylith.
>>> Any suggestions?
>>>
>>
>> There is nothing attached. The PyLith master branch tracks PETSc
>> knepley/pylith, so all fixes
>> should be there.
>>
>>   Thanks,
>>
>>     Matt
>>
>>
>>>
>>> R
>>>
>>>
>>> —————————————————————————————————————
>>> —————————————————————————————————————
>>> Romain Jolivet
>>> Postdoctoral Fellow
>>>
>>> University of Cambridge
>>> Department of Earth Sciences
>>> Bullard Labs
>>> Madingley Rise
>>> Madingley Road
>>> Cambridge CB3 0EZ
>>> United Kingdom
>>>
>>> email: rpj29 at cam.ac.uk
>>> Phone: +44 1223 748 938
>>> Mobile: +44 7596 703 148
>>>
>>> France: +33 6 52 91 76 39
>>> US: +1 (626) 560 6356
>>> —————————————————————————————————————
>>> —————————————————————————————————————
>>>
>>> _______________________________________________
>>> CIG-SHORT mailing list
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>>
>>
>>
>>
>> --
>> What most experimenters take for granted before they begin their
>> experiments is infinitely more interesting than any results to which their
>> experiments lead.
>> -- Norbert Wiener
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>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which their
> experiments lead.
> -- Norbert Wiener
>  _______________________________________________
> CIG-SHORT mailing list
> CIG-SHORT at geodynamics.org
> http://lists.geodynamics.org/cgi-bin/mailman/listinfo/cig-short
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>
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-- 
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which their
experiments lead.
-- Norbert Wiener
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