[CIG-SHORT] Problem running user compiled version of Relax

[Oliver Boyd]

Hello,
I compiled a version of relax using source obtained from the git repository
(6/16/15) with the intel compilers and mkl library in order to run jobs on a
cluster. Everything seemed to go fine during compilation. I wasn't sure how
to install it so I simply copied relax to the parent directory of build in
which resides setup.sh (not sure that this is a problem). I then ran
setup.sh and ran an example. The example runs fine with the binary version
available from the CIG website (v1.0.7).

The configure options I use are
./waf configure --proj-dir=/usr/bin --gmt-dir=/usr/bin
--gmt-incdir=/usr/include --gmt-libdir=/usr/lib64
--mkl-libdir=/opt/intel/mkl/lib/intel64/ --mkl-incdir=/opt/intel/mkl/include
--check-c-compiler=icc --check-fortran-compiler=ifort
--check-cxx-compiler=icpc

When I submit the job to the queueing system, I get
# 
----------------------------------------------------------------------------
# RELAX: nonlinear postseismic relaxation with Fourier-domain Green's
function
#     * Intel MKL implementation of the FFT
#     * parallel OpenMP implementation with 001/002 threads
#     * export to longitude/latitude text format cancelled
(--no-proj-output)
#     * export to VTK format cancelled                     (--no-vtk-output)
# 
----------------------------------------------------------------------------
# grid dimension (sx1,sx2,sx3)
  512  512  512
# sampling (dx1,dx2,dx3), smoothing (beta, nyquist)
  1.00E+0  1.00E+0  1.00E+0  2.00E-1  2.00E+0
# origin position (x0,y0) and rotation
  0.00E+0  0.00E+0  0.00E+0
# observation depth (displacement and stress)
  0.00E+0  5.00E+0
# output directory
 ./NewMadridThrust_Afterslip_GMMh01 (time report:
./NewMadridThrust_Afterslip_GMMh01/time.txt)
# lambda, mu, gamma (gamma = (1 - nu) rho g / mu)
  3.50E+01  3.50E+01  5.68E-04
# time interval, (positive time step) or (negative skip, scaling)
  2 ­5 0.5
# output every   1.00E+1 time unit
# number of observation planes
    0
# number of observation points
    0
# number of stress observation segments
    0
# number of prestress interfaces
    0
# number of linear viscous interfaces
    0
# number of nonlinear viscous interfaces
    0
# number of fault creep interfaces
    1
# 
----------------------------------------------------------------------------
# n    depth   gamma0 (a-b)sig friction cohesion
# 
----------------------------------------------------------------------------
001  0.00E+0  1.00E+0  1.20E+0  0.00E+0  0.00E+0
# number of afterslip planes
    1
# 
----------------------------------------------------------------------------
# n        x1       x2       x3   length    width strike    dip   rake
# 
----------------------------------------------------------------------------
001   9.65E+1 -3.57E+1  1.50E+1  2.00E+2  1.61E+2  173.2   31.9   90.0
# number of inter-seismic strike-slip segments
    0
# number of inter-seismic tensile segments
    0
# number of events
    1
# number of coseismic strike-slip segments
    2
# 
----------------------------------------------------------------------------
# n     slip       xs       ys       zs  length   width strike   dip   rake
# 
----------------------------------------------------------------------------
001  5.00E+0  1.89E+1 -1.05E+1  5.10E+0 4.00E+1 1.87E+1  173.2  31.9   90.0
002  6.63E+0  1.91E+1 -8.94E+0  0.00E+0 4.00E+1 5.33E+0  173.2  73.0   90.0
# 
----------------------------------------------------------------------------
# number of coseismic tensile segments
    0
# number of coseismic dilatation point sources
    0
# number of surface loads
    0
# max sampling size (hor.,vert.): 1.60E+1 2.13E+0
# 
----------------------------------------------------------------------------
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image              PC                Routine            Line        Source
relax              00000000005AF571  Unknown               Unknown  Unknown
relax              00000000005ADCC7  Unknown               Unknown  Unknown
relax              000000000055E794  Unknown               Unknown  Unknown
relax              000000000055E5A6  Unknown               Unknown  Unknown
relax              000000000050D184  Unknown               Unknown  Unknown
relax              000000000051132D  Unknown               Unknown  Unknown
libpthread.so.0    0000003F77C0F710  Unknown               Unknown  Unknown
relax              0000000000454AB7  Unknown               Unknown  Unknown
relax              00000000004143E1  Unknown               Unknown  Unknown
relax              0000000000410C6E  Unknown               Unknown  Unknown
libc.so.6          0000003F7701ED5D  Unknown               Unknown  Unknown
relax              0000000000410B79  Unknown               Unknown  Unknown
srun: error: compute87: task 0: Exited with exit code 174

Please let me know what additional information you need.

Thank you for your help,
Oliver


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