[CIG-SHORT] Pylith installer 2.1.2-0: Petsc build fails

[Matthew Knepley]

On Fri, Jun 17, 2016 at 8:26 AM, Ravi Kanda <kanda.vs.ravi at gmail.com> wrote:

> Hi Brad,
>
> Using the just released Pylith-installer-2.1.2-3.  Everything up to cmake
> builds and installs, but then encounters a Petsc build failure in
> plexdistributef.c:
> =============
> ...
> [ 56%] Building C object
> CMakeFiles/petsc.dir/src/dm/impls/plex/ftn-auto/plexinterpolatef.c.o
> /home/rkanda/sw/src/pylith/pylith-installer-2.1.2-0/petsc-pylith/src/dm/impls/plex/ftn-auto/plexdistributef.c:
> In function ‘dmplexdistributedata_’:
> /home/rkanda/sw/src/pylith/pylith-installer-2.1.2-0/petsc-pylith/src/dm/impls/plex/ftn-auto/plexdistributef.c:173:15:
> error: dereferencing pointer to incomplete type
>   MPI_Type_f2c(*(datatype)),originalData,
>                ^
> make[5]: ***
> [CMakeFiles/petsc.dir/src/dm/impls/plex/ftn-auto/plexdistributef.c.o] Error
> 1"
> ...
>

If you were just building PETSc, this usually signals that you have an old
copy of the 'sowing' package. I would recommend
you delete the PETSC_ARCH directory and reconfigure/rebuild.

Brad, I thought that the installer built from scratch, but maybe I am wrong.

  Thanks,

    Matt


> =============
> Petsc configure seems to have finished without 'problems', as far as I can
> tell (attached,
> <SRC>/petsc-pylith/arch-pylith/lib/petsc/conf/configure.log). I am
> attaching a TGZ file with the full build/install STDOUT, as well as the
> CONFIG log from the petsc-pylith directory.
>
> I realize you are probably busy with CIG tutorial prep, so if there is no
> simple fix, I'll just use my previously installed v2.1.0, or try the 2.1.2
> binary.
>
> Please let me know either way.
>
> Thanks,
> Ravi.
>
> --
>
> ----------------------------------------------------------------------
>  Ravi Kanda
>  Adjunct Assistant Professor
>  Department of Geology
>  Utah State University
>  4505 Old Main Hill
>  Logan UT 84322-4505
>  --------------------------
>  Web Page: https://ravi-vs-kanda.github.io
>
> ----------------------------------------------------------------------
> For a human being, the unexamined life is not worth living - SOCRATES
> ----------------------------------------------------------------------
>
>
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>
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