[aspect-devel] Boundary composition
Lev Karatun
lev.karatun at gmail.com
Thu Sep 29 05:14:48 PDT 2016
Hi John,
thank you for the suggestion. When I tried to use the option (using the
latest versions of dealII and aspect) I got a segfault unfortunately:
MXM: Got signal 11 (Segmentation fault)
==== backtrace ====
0 /lib64/libc.so.6(+0x326a0) [0x7fffe7b8b6a0]
1
/home/r/russ/lkaratun/aspect/dealiidev/lib/libdeal_II.so.8.5.0-pre(_ZNK6dealii12CellAccessorILi3ELi3EE29neighbor_of_neighbor_internalEj+0x55)
[0x7ffff
6bb1715]
2
/home/r/russ/lkaratun/aspect/dealiidev/lib/libdeal_II.so.8.5.0-pre(+0x3a736cc)
[0x7ffff60f76cc]
3
../aspect(_ZN6aspect9SimulatorILi3EE19setup_system_matrixERKSt6vectorIN6dealii8IndexSetESaIS4_EE+0x6ff)
[0xb059cf]
4 ../aspect(_ZN6aspect9SimulatorILi3EE10setup_dofsEv+0x414) [0xb293e4]
5 ../aspect(_ZN6aspect9SimulatorILi3EE3runEv+0x1d6) [0xb29996]
6 ../aspect(main+0x1a9) [0x865f59]
7 /lib64/libc.so.6(__libc_start_main+0xfd) [0x7fffe7b77d5d]
8 ../aspect() [0x7ca27d]
Best regards,
Lev Karatun.
2016-09-28 12:58 GMT-04:00 John Naliboff <jbnaliboff at ucdavis.edu>:
> Hi Lev,
>
> Initial composition would be the correct boundary choice for what you are
> trying to do.
>
> One thing that may help is to use the discontinuous composition
> discretization option, if you have not tried it already. This helps tracks
> compositional field boundaries more accurately through time and removes
> compositional field diffusion effects. Certainly helped with some of the
> models I am running.
>
> Below is a section from a .prm file where I use this option. FYI, you
> will want to use the development version of dealii (master branch from
> Github) if you use the discontinuous composition discretization option.
> The model will run with dealii version 8.4.1, but the development version
> helps reduce the memory requirements dramatically.
>
> If this option helps, please let us know.
>
> Cheers,
> John
>
> *************************************************
> John Naliboff
> Assistant Project Scientist, CIG
> Earth & Planetary Sciences Dept., UC Davis
>
> *# Use disccontinous composition bound preserving limiter**subsection Discretization** set Use discontinuous composition discretization = true** subsection Stabilization parameters** set Use limiter for discontinuous composition solution = true # apply the limiter to the DG solutions** set Global composition maximum = 1.0, 1.0, 1.0, 1.0** set Global composition minimum = 0.0, 0.0, 0.0, 0.0** end**end*
>
>
>
> On 09/27/2016 01:09 PM, Lev Karatun wrote:
>
> Hi,
>
> I'm doing a lithospheric scale convergence model, imposing influx (along
> the x axis) at the top half of the side walls (y=0, YMAX), and outflux at
> the bottom half. Over the course of the simulation, the lithosphere at the
> side of the model (the part that was injected) gets progressively thinner.
> The vertical (z) and lateral (y) velocities are set to zero at the
> boundary, but I noticed that a lateral flow is still happening very close
> to the side wall, and my guess is that due to the material mixing the
> outermost cells don't consist of lithoshperic material anymore, but only
> of, let's say, 80% lithospheric and 20% mantle. So the question is: is it
> possible to manually restrict the incoming material to be of the same
> properties as it was in the outer cells at the beginning of the simulation
> (as opposed to the previous time step, which as fast as I understand is
> defining the material right now -- correct me if I'm wrong). Also, I was
> wondering if parameters in section Boundary composition model are related
> to this? I tried setting Model name to "initial composition" but it didn't
> seem to change anything.
>
> Thanks in advance.
>
> Best regards,
> Lev Karatun.
>
>
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