[CIG-SEISMO] SPECFEM3D - Problem with creating topography with mesh_mount.py

Shahar Barak shaharb at stanford.edu
Thu Jul 25 14:27:21 PDT 2013


Dear Emanuele,

I am trying to install GEOCUBIT, but it fails to import cubit.

GEOCUBIT.py --chklib
[('--chklib', '')] []
--------, MPI OFF, serial mesher ready
--------, Numpy ON
error importing cubit

Any ideas what could be the problem?

I have Cubit 13.2

Thanks,


Shahar Barak
=======================================
Crustal Geophysics Research Group
Department of Geophysics, Stanford University
397 Panama Mall, Stanford CA 94305-2215
Mitchell Building, room 463
Office: (650) 725 8229
Cell: (650) 276 6169
shaharb at stanford.edu*
*


On Sun, Jul 7, 2013 at 4:50 PM, emanuele casarotti <
emanuele.casarotti at gmail.com> wrote:

> Hi Shahar,
>
> 1) it could be important especially if the boundaries of  topography
> doesn't coincide with the boundaries of the volume.
> 2)
> http://www.geodynamics.org/wsvn/cig/seismo/3D/GEOCUBIT/trunk/?#a41af1a23f02657a972f9d0b9bb1d6fcc
>
>
>
> On Mon, Jul 8, 2013 at 12:26 AM, Shahar Barak <shaharb at stanford.edu>wrote:
>
>> 1/ Why does the size of the volume makes a difference?
>> 2/ Where can I find Geocubit? I don't see anything on the website except
>> a powerpoint presentation. What exactly is it? is there documentation on
>> how to use it?
>>
>> Thanks,
>>
>> Shahar
>>
>>
>>
>> On Sun, Jul 7, 2013 at 3:04 PM, emanuele casarotti <
>> emanuele.casarotti at gmail.com> wrote:
>>
>>> Hi shahar
>>>
>>> Yes i believe that the problem could occur from the side of your topo...
>>>
>>> I see 2 options
>>> 1) decrease the size of the big volume that intersect the topo
>>> 2) take a look at geocubit package (cig seismo 3D repository) expecially
>>> if you plan to refine the topo
>>>
>>> Emanuele
>>>
>>> Il giorno 07/lug/2013, alle ore 23:54, Shahar Barak <
>>> shaharb at stanford.edu> ha scritto:
>>>
>>> Cubit ver 13.2. File attached.
>>>
>>> Thanks!
>>>
>>> Shahar
>>>
>>>
>>>
>>> On Sun, Jul 7, 2013 at 9:43 AM, emanuele casarotti <
>>> emanuele.casarotti at gmail.com> wrote:
>>>
>>>> Can you show your journal file and the version of cubit that you are
>>>> using?
>>>>
>>>> Emanuele
>>>>
>>>> Il giorno 07/lug/2013, alle ore 17:45, Shahar Barak <
>>>> shaharb at stanford.edu> ha scritto:
>>>>
>>>> Hi,
>>>>
>>>> I'm using mesh_mount.py from the Mount St Helens example in SPECFEM3D
>>>> to create a mesh with topography, but at a different location.
>>>> The problem is that after the Imprint All command the volume
>>>> isn't separated into the above topography and below topography. I don't get
>>>> any error messages.
>>>> Does anyone have experience with this? Any ideas what might be the
>>>> problem?
>>>> Is it possible that the problem is that the topography at the edges it
>>>> to rugged?
>>>>
>>>> Thanks,
>>>>
>>>> Shahar
>>>>
>>>>
>>>> Shahar Barak
>>>> =======================================
>>>> Crustal Geophysics Research Group
>>>> Department of Geophysics, Stanford University
>>>> 397 Panama Mall, Stanford CA 94305-2215
>>>> Mitchell Building, room 463
>>>> Office: (650) 725 8229
>>>> Cell: (650) 276 6169
>>>> shaharb at stanford.edu*
>>>> *
>>>>
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>>>>
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>>>
>>> <create_mesh.py>
>>>
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>>
>>
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