[CIG-SHORT] error message

luigi vadacca luigi.vadacca at ingv.it
Mon Oct 24 10:49:53 PDT 2011


Dear all,

I installed pylith-installer.1.6.1-0.tgz [2011-07-15]. When I run a
job, I have the following error message.
How can I fix this?
Thanks
Luigi

vadacca at calamaro ATF_modeling2_2D_estrusa]$ Traceback (most recent call last):
  File "/home/vadacca/pylith/lib/python2.6/site-packages/pylith/apps/PetscApplication.py",
line 75, in onComputeNodes
    self.main(*args, **kwds)
  File "/home/vadacca/pylith/lib/python2.6/site-packages/pylith/apps/PyLithApp.py",
line 112, in main
    self.problem.run(self)
  File "/home/vadacca/pylith/lib/python2.6/site-packages/pylith/problems/TimeDependent.py",
line 142, in run
    self.formulation.step(t, dt)
  File "/home/vadacca/pylith/lib/python2.6/site-packages/pylith/problems/Implicit.py",
line 232, in step
    self.solver.solve(dispIncr, self.jacobian, residual)
  File "/home/vadacca/pylith/lib/python2.6/site-packages/pylith/problems/problems.py",
line 179, in solve
    def solve(self, *args): return _problems.SolverNonlinear_solve(self, *args)
RuntimeError: St9bad_alloc
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD
with errorcode -1.

NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun has exited due to process rank 0 with PID 2626 on
node calamaro exiting without calling "finalize". This may
have caused other processes in the application to be
terminated by signals sent by mpirun (as reported here).
--------------------------------------------------------------------------
/home/vadacca/pylith/bin/nemesis: mpirun: exit 255
/home/vadacca/pylith/bin/pylith: /home/vadacca/pylith/bin/nemesis: exit 1


--
Luigi Vadacca
PhD student
Istituto Nazionale di Geofisica e Vulcanologia
via di Vigna Murata, 605 - 00143 Rome, Italy
phone: +39 06 51860751
skype:  luigigeo25
email: luigi.vadacca at ingv.it


More information about the CIG-SHORT mailing list