January 2015 Archives by date

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Starting: Thu Jan 1 05:11:50 PST 2015
Ending: Sat Jan 31 19:48:33 PST 2015
Messages: 432

• [cig-commits] [commit] branch 'solid_solution_molar_mass' created   cig_noreply at geodynamics.org
• [cig-commits] [commit] solid_solution_molar_mass: molar_mass function in SolidSolution (ead7694)   cig_noreply at geodynamics.org
• [cig-commits] [commit] solid_solution_molar_mass: Add set_method to solid solution (b2c5363)   cig_noreply at geodynamics.org
• [cig-commits] [commit] solid_solution_molar_mass: Updated todo.txt (d0b4772)   cig_noreply at geodynamics.org
• [cig-commits] [commit] solid_solution_molar_mass: Add G to comparison arrays. Not a great test, as this is zero for MTait, but at least checks it is set... (84132de)   cig_noreply at geodynamics.org
• [cig-commits] [commit] solid_solution_molar_mass: Use harmonic mean for now (090521b)   cig_noreply at geodynamics.org
• [cig-commits] [commit] solid_solution_molar_mass: Add arithmetic and harmonic averages for G in solidsolution (thanks to Mark Panning for pointing out they were missing) (30107f8)   cig_noreply at geodynamics.org
• [cig-commits] [commit] solid_solution_molar_mass: Check for zero shear modulus (92fd624)   cig_noreply at geodynamics.org
• [cig-commits] [commit] solid_solution_molar_mass: added test for molar_mass() (d96ae53)   cig_noreply at geodynamics.org
• [cig-commits] [commit] solid_solution_molar_mass: merge new commits (fe211b4)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Pass the test of LuoYang_fluid_solid_kernel example, which has been reported unstable when Stacey ABC is used (7b13894)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: change back the simulation type to 1 and the SAVE_FORWORD to .true (ab5b24f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Merge branch 'devel' of github.com:xiezhinan/specfem2d into devel (ab07bc5)   cig_noreply at geodynamics.org
• [cig-commits] [commit] doc_updates: Add a bit on MGD (d124c5a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Name change: mtait -> hp_tmt, isomt -> mtait (a4841fe)   cig_noreply at geodynamics.org
• [cig-commits] [commit] doc_updates: fix doc-string formatting (c380468)   cig_noreply at geodynamics.org
• [cig-commits] [commit] doc_updates: fix link in documentation (0116539)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Should not validate G, G' for cases when it is nan (dcd0f36)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Write tests, fix up some validation (1801d7c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Remove integer check (11466f5)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Apply patch from Timo (6cb3468)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #91 from ian-r-rose/adjust_validation (1f0b803)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Name change: mtait -> mt for function-name consistency (6e4d527)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: HP_TMT function blurb updated (2992e6a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Added tests for MT - HP_TMT endmembers (a363ce0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Added reset of attributes during EoS reset (69e63fe)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Added detail to HP_TMT and MT class documentation (252dfa3)   cig_noreply at geodynamics.org
• [cig-commits] [commit] doc_updates: Add note to set_method documentation. (1ab7a08)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Changed set_method reset algorithm (e2d8657)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: commit the recent change to pml_init.F90 to allow an adjustment of PML parameter if the flag PML_parameter_adjustment in constants.h.in set to be .true. (93d085e)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: remove some unneeded comments (878fa3c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Merge branch 'devel' of github.com:xiezhinan/specfem2d into devel (27795ed)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: "Buildbot ran code beautifier." (c372685)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Changed set_method reset algorithm to just reset P and T and updated warning (74daca2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: refine some comments in pml_init.F90 and remove some unneeded codes (978cc44)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: "Buildbot ran code beautifier." (a7da646)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Tweak change to set_method. (b057769)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Remove EoS change (feecc29)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Changed set_method reset algorithm (c013261)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Changed set_method reset algorithm (60cfe99)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Changed set_method reset algorithm (bd8b3a9)   cig_noreply at geodynamics.org
• [cig-commits] [commit] split_mt: Changed set_method reset algorithm (2f2135d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #99 from geodynamics/split_mt (ed52c21)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master's head updated: Merge pull request #99 from geodynamics/split_mt (ed52c21)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: This new example was not changed by the split_mt PR. Quick fix to that. (847744b)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #105 from ian-r-rose/fix_example_eos (8b5b24c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] doc_updates: Merge branch 'master' into doc_updates (b439f5f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] doc_updates's head updated: Merge branch 'master' into doc_updates (b439f5f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Add KML output (8e77a92)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Fix mesher element resizing (944961a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Make element resizing an option (bed3d9a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Update test for new mesher (c45a18b)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Move parallel HDF5 check (f4817d6)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #35 from eheien/master (f26b7fa)   cig_noreply at geodynamics.org
• [cig-commits] [commit] doc_updates: fix dead sphinx link (8e14641)   cig_noreply at geodynamics.org
• [cig-commits] [commit] doc_updates: cleanup (f872cc9)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #98 from geodynamics/doc_updates (9ee39c0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master's head updated: Merge pull request #98 from geodynamics/doc_updates (9ee39c0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Add placeholder directories. (1a7919d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Update Makefiles to match other SPECFEM code. (d4d879a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #14 from QuLogic/build-stuff (35bd59c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Use argparse in Python program. (6f8d78d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Remove unused imports and simplify Python plotter. (4cda77f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Ensure Python plotter will run on Python 3. (3f406c6)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #15 from QuLogic/python-opt (5ac1833)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: add molar_mass (515aa0f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #106 from sannecottaar/molar_mass_solid_solution (13c3b5d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Adding an output file for the berkeley-r.in case (732a4fc)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge branch 'master' of github.com:geodynamics/sw4 (d5da240)   cig_noreply at geodynamics.org
• [cig-commits] [commit] baagaard/add-release-2.1.0: Add updates from README to release announcement. (d123be9)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: BLD: Move extra programs into auxiliaries directory. (d7babb2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: BLD: Move force_ftz.c to specfem2d directory. (04c7005)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: BLD: Switch m4 to submodule. (4e2953f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Add underscores to some file names. (a8a47ff)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: BLD: Modify scotch to build the same as specfem3D. (1284097)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: BLD: Port non-recursive make from 3D code. (5b27169)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: BLD: Get out-of-source builds working here. (e44b579)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Fix bug in MPI mode. (de54f29)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Fix bug in scotch Makefile. (f4abcbd)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Add some new files to ignore list. (bb56942)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Simplify definition of GLL points. (71171d3)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Add compiled files to ignore list. (3efe46a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Use configparser to read settings from Par_file. (c7ef3f2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Add plotting toggle. (05f9922)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #16 from QuLogic/python-configparser (c63d455)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: rename base_material to endmembers (5bd1b5a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #109 from bobmyhill/rename_base_material (8aee592)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: preparing manual for release 1.2 (7da858d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: documenting force simtype, some notes on instaseis in inparam_advanced (4b1bd49)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: adding notes about generating instaseis DBs, TODO: describe fieldtransform (829220c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: adding note on fieldtransform (d50e105)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: tidy up (dc41a6f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: updating reference + moving paper to cite to the top (7e30b17)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Remove unused imports. (9bfd9c9)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Split GLL functions into a separate file. (4573796)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Factor grid definition into its own file. (3918375)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Rename defines to config. (d5d43c5)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Move global index generation into config. (08c9448)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Rename functions to be more Pythonic. (58e54c7)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Rename main program to specfem1d.py. (56ee5c1)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #17 from QuLogic/python-refactor (81ba23d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Set SVNversion to RELEASE_1.2 in submit.csh (acff10d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Modify the file list_for_Zhinan_for_SPECFEM2D_PMLs.txt, since the plane incident bug have already been fixed by Dimitri. See the subroutine rotate_mesh_for_plane_wave in part_unstruct.F90. That subroutine is adapted from two of Dimitri's old codes, which also added again in UTILS/program_rotate_edges_of_external_mesh_for_plane_wave_boundaries. (f7f8aed)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Minimum chunk size should be 1 (677c6c2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge branch 'master' of https://github.com/geodynamics/axisem (0f3b7cc)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: updates scripts and reference solutions for new file name format **net**.**sta**... (3ad6405)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: updates rules.mk for tomography executables due to changes in src/shared/parallel.f90 (e1a1eff)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: updates calls to write_seismograms(), putting runtime check inside the routine; adds some additional synchronization calls to facilitate debugging of simulation setup crashes due to memory issues (245aaba)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: adds pnm-image plotting routine to topo_bathy file readings for debugging purposes (cb30df2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: changes output format of seismogram names to **network**.**station**.. (72999fd)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: updates manual for new seismogram format **net**.**sta**... (b65ddc5)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: renames reference seismograms for new format **net**.**sta**... (878d986)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: updates processing scripts for **net**.**sta**... file names (83331d2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: updates NX_BATHY/NY_BATHY usage in values_from_mesher.h (aafa354)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: updates version numbering to version 7.0 (7f31cc2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: updates formatting and removes trailing spaces (7b315ac)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: updates file attributes to treat adjoint source files **.adj in EXAMPLES/*/SEM/ as binary files (8f5f01d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: "Buildbot ran code beautifier." (133892d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: small code beautify (2601232)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Only import matplotlib if plotting is on. (4faa8a0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Add command-line argument to disable plotting. (63a378a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #18 from QuLogic/optional-plotting (9969ec4)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: added utils/clean_listings_specfem.pl , which is used by BuildBot (c7a62e9)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Bug fix (cdf74ff)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #36 from eheien/master (0aca7bf)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: correct test output (2c49149)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #241 from tjhei/test_output (1a11b0a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: updated comments in utils/clean_listings_specfem.pl (eff846f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: fixed a typo (a8bfe22)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: fixed a typo (de26cc3)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: added Christina Morency's section about poroelastic runs to the manual, and fixed a problem on the cover (8e594fe)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: updated doc/USER_MANUAL/specfem_3d_globe-cover_small.jpg (58195e0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Merge pull request #304 from komatits/devel (ef09037)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: do not use grep -P (49b627d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #114 from tjhei/testcompat2 (44b9d7e)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Fix bug in GLJ derivative calculation. (5bbd56d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Remove redundant loop. (ab48b2b)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #19 from QuLogic/python-fix (067b938)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: fixed a typo in UTILS/sample_code_to_compute_SEM_derivatives_on_a_mesh/Makefile (cecf848)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Add update function for boundary composition. (9d9ceee)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Unify temperature and composition boundary conditions. (cbf1eae)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #243 from gassmoeller/update_composition_boundaries (7eb5dd7)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Fixing submit script (aa78e39)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Etienne Bachmann fixed the write_seismograms() inverted buffer bug (5d5f257)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: require deal.II 8.2 and remove old checks (511d40d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: add changelog entry (ec114d6)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #244 from tjhei/req_deal82 (a35a082)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Add snapshotting option. (85522a6)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #20 from QuLogic/python-snapshot (2ccfba1)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Fix tests and allow for no prescribed boundary temperature. (7bdad81)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Update comment. (d7b36a8)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #246 from gassmoeller/check_boundary_temperature (36e4420)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Increase limit for the number of inner iterations. (1acb52a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Reduce the aggregation threshold for the AMG. (fdc9f02)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Add some commentary. (ef6253b)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: fix test output (9d359c8)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #247 from tjhei/pull_234 (01f19ef)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: changing sub version naming scheme (9aa15a7)   cig_noreply at geodynamics.org
• [cig-commits] [commit] branch 'release_1.2' created   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: hardcoding release version in submit to be independent of git (672dc97)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Modified advanced ipython notebook (543ab52)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #115 from bobmyhill/notebook_update (ad730f0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Add new example for building a planet with self-consistent gravity, pressure, and density profiles. (9988c72)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Add test output (26f27f2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Update text output and some comments (8c3843e)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Change to a more reasonable mineralogy. (6469986)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Update test output (606f0fd)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #110 from ian-r-rose/build_planet_example (9422ec5)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: adding README and HISTORY (9579072)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: set tw=79 for nicer formatting in GIT page (b1e234c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next: Ignore test output (ebb74b2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next: Do not forward declare C++ things from std:: (434ba5c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next: DM: Turn on viewing by options (5df3a1d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next: Merge branch 'knepley/fix-clang' into next (57295cf)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next: Merge branch 'knepley/feature-dm-view' into next (af3aa35)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next's head updated: Merge branch 'knepley/feature-dm-view' into next (af3aa35)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: Remove CMake and Testing files for release (1a363f8)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: Script to remove all git files for final release (49064d1)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: Some more updates on the manual (4387a70)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: Added compiled version of manual (63b7b19)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: Remove unnecessary files in SOLVER/UTILS (af6e649)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: Mention 'force' mode in HISTORY file (9490e43)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: If using Umlauts once, stick with it (README file) (ec5ac1f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: Clarifications on Instaseis databases (d75b01c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: Updated Manual pdf (8b6dae7)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: putting time schemes in a separate section as it is relevant also for normal runs (ebc156a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: Merge branch 'release_1.2' of https://github.com/geodynamics/axisem into release_1.2 (465be29)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: Update PDFs (09e9c6c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] release_1.2: remove_all_git_dirs.sh is executable (802f3df)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Change dtype of ibool to integer. (428a0e5)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Simplify grid plotting. (77b3eb7)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Simplify homogeneous grid creation a bit. (c4a0a79)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Simplify GLJ derivative calculation. (99350f0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Simplify Jacobian calculation. (98097d3)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Simplify Lagrange derivatives a bit. (d8f09c2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Simplify stiffness matrix creation. (a433f54)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Simplify mass matrix creation slightly. (420d361)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Tweak main program a bit. (b05fbed)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #21 from QuLogic/python-optimize (33b512d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Modif DSM dir 1 (fcf21ca)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] master: modernizing examples (b6346f5)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] master: removed stray fe_num in example_composition.py (60cfec8)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: Modifs directories and install in DSM (762b689)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Adding CUDA support part 1 : Configuration for CUDA mode, calls to (currently) dummy CUDA functions. Please do not attemp t to turn on the GPU_MODE until next commit (df0a2d8)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: fix bug for ifort (2877bfb)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Buildbot ran the code beautifier. (1fb9d53)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Amend flags.guess for the xlf compiler. Some values are antiquated (-Q...) and some would possibly work on linux (or BG) but not on AIX. (a5d1c3e)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Adding CUDA support final part (7c31a43)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Let the original Par_file (38bc26f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Buildbot ran the code beautifier. (7639612)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] knepley/fix-fault-intersect: Fault: Fix problem with intersecting faults - The problem was a faulty check for cross edges - Counting boundary fault edges was contaminated with split edges from other faults in the support of unsplit vertices - The solution is to check each edge for presence in the fault label (5061995)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next: Merge branch 'knepley/fix-fault-intersect' into next (857c84f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next's head updated: Merge branch 'knepley/fix-fault-intersect' into next (857c84f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master's head updated: Fault: Fix problem with intersecting faults - The problem was a faulty check for cross edges - Counting boundary fault edges was contaminated with split edges from other faults in the support of unsplit vertices - The solution is to check each edge for presence in the fault label (5061995)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge branch 'knepley/fix-clang' (90e6ff9)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master's head updated: Merge branch 'knepley/fix-clang' (90e6ff9)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge branch 'knepley/feature-dm-view' (bfe729b)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master's head updated: Merge branch 'knepley/feature-dm-view' (bfe729b)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Be less strict in which types of exceptions we catch. (e511a5b)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #251 from bangerth/improve-error-message (2c1b490)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: PEP8 all Python files. (31278bf)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #22 from QuLogic/pep8 (58c6e68)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Adjust a few more places where we can produce better error messages. (9739ec6)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #254 from bangerth/improve-error-messages (3f763d3)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Correct bug in save arrays solver ofr coupling with DSM (2578ab3)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Correct bug in save_arrays_solver for coupling with DSM 2 (good) (57a4b7e)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: set initial guess for inner solvers to zero (44716eb)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] master: Merge pull request #252 from tjhei/fix_initial_guess (a402e9e)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Introduce GeometryModel::has_curved_elements() (fe3cf22)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] master: Merge pull request #253 from tjhei/new_has_curved_el (23371c5)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] baagaard/test-buried-fault-intersect: Added test of intersection of buried faults for tet4 cells. (c780ba2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] baagaard/test-buried-fault-intersect: Add description of test. (ba7a1e8)   cig_noreply at geodynamics.org
• [cig-commits] [commit] baagaard/test-buried-fault-intersect: Very minor cleanup of .cfg file. (4b5f506)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] next's head updated: Merge branch 'knepley/fix-fault-intersect' into next (bb2a45f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Use correct exceptions instead of generic raise. (398a2b0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Use print function instead of statement. (5217728)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] master: py: Make config parsing work on Py3k. (04f0785)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: py: Add absolute imports from __future__. (861f296)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #23 from QuLogic/python3 (d71011c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Use a manifold to generate better meshes for the shell. (f050b9b)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] master: fix test output (f2e43e0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #242 from tjhei/pull_229 (eef6299)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Change averaging in dynamic topography postprocessor from volume weighted to surface area weighted (14d2520)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Update of dynamic topography postprocessors and test (32500e5)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Updating location and naming in DT postprocessor (ac54b57)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #248 manually (09cd1e0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Organisation of DSM directory for Nobu modifs 3 (f159796)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Organisation of DSM directory for Nobu modifs 4 (aa005dc)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: added the license at the end of the users manual, as in 3D and 3D_GLOBE (c2bcc47)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: more logos (03a64dd)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] master: Add missing compress calls. (19b3d19)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Workaround for is_contiguous() assertion failing in PETSc wrappers. (0e9e4c2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #257 from ian-r-rose/fix_petsc_calls (925399c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: change depth_average zones from 100 to 10 (d75f6a6)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: Remove non-ASCII characters in sources of DSM big storage version (462e8d2)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: Merge pull request #359 from komatits/devel (3a91365)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: updated list_for_Zhinan_for_SPECFEM3D_PMLs.txt (829edf4)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: added a list from Zhinan to list_for_Zhinan_for_SPECFEM3D_PMLs.txt (c8413d6)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: added removal / conversion of accented letters and other non-ASCII characters to utils/clean_listings_specfem.pl (151942b)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: fixed a small problem in my new utils/clean_listings_specfem.pl: file permissions were erased (03bb77c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: ran the script to remove non-ASCII characters (f745777)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Merge pull request #308 from komatits/devel (6d26d46)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: Merge pull request #189 from komatits/devel (d2deb1c)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: fixed the d? problems noticed by Elliott, replaced them with "degrees" (4ded73c)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: commit new changes to CPML implementation (7dfa091)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: fix the error of station name in adj_seismogram_Tromp2005.f90 (8b7dc04)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] excess_properties: Update (0d0faac)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] excess_properties: Update (da0ca3b)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: added a comment about GPUs (76d972f)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] aspect-1.2: remove broken periodic_box for now (a8eccba)   cig_noreply at geodynamics.org
• [cig-commits] [commit] aspect-1.2: release task: update manual (8c1e1e9)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: release task: update version and changes.h (01c1fc2)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: increased the magnitude of the source in EXAMPLES/fluid_solid/fluid_solid_external_mesh/SOURCE_fluid_solid for clarity (fbb60f8)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: added suggestions from ZhangChang-Hua (850d953)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: fix the problem of using elastic PML for viscoelastic wave simulation (b45992f)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] master: Merge pull request #264 from bangerth/minor-edits-to-release-announcement (3393a76)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: added more details about PML to the manual (about regular elements inside the PMLs for better time stability) (7f5eb46)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] devel: added more details about PML to the manual (about regular elements inside the PMLs for better time stability) (783b2cd)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] master: Small changes (2c5f6a4)   cig_noreply at geodynamics.org
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• [cig-commits] [commit] master: Merge branch 'master' of https://github.com/geodynamics/vq (83a5400)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Untested fix for HDF5 events import (1d8a12d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge branch 'master' of https://github.com/geodynamics/vq into read_events_hdf5 (4721ab0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Added handling for no event filter (3bb3d3c)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: HDF5 event file reading successful, basic pyvq plots working (db0d9a1)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge branch 'master' of https://github.com/kwschultz/vq into read_events_hdf5 (761b5e2)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge branch 'master' of https://github.com/kwschultz/vq (653fcc8)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge branch 'read_events_hdf5' (72acee5)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: hdf5 compile fix (3755ce0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: dangling delete fix (2e9b162)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #38 from kwschultz/master (941b3d7)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: update compatibility with cubit13+ (0f3b542)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: fix a few typos (e758675)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #270 from tjhei/typos (a0ff764)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Fix pressure bounds of steinberger material model. (681a7b7)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Add entry in changelog. (2d921d7)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #269 from gassmoeller/fix_steinberger_pressure_bounds (44ed2e9)   cig_noreply at geodynamics.org
• [cig-commits] [commit] branch 'baagaard/fix-pytest-fault' created   cig_noreply at geodynamics.org
• [cig-commits] [commit] baagaard/fix-pytest-fault: Merge branch 'knepley/fix-fault-intersect' (2c906f0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] baagaard/fix-pytest-fault: Added missing group to mesh in fault pytest. (d12f99d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master's head updated: Merge branch 'knepley/fix-fault-intersect' (2c906f0)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge branch 'baagaard/fix-pytest-fault' (f27f9b1)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next: Merge branch 'baagaard/fix-pytest-fault' into next (9e4a8ff)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next's head updated: Merge branch 'baagaard/fix-pytest-fault' into next (9e4a8ff)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master's head updated: Merge branch 'baagaard/fix-pytest-fault' (f27f9b1)   cig_noreply at geodynamics.org
• [cig-commits] [commit] branch 'baagaard/fix-arrayfwd-std' created   cig_noreply at geodynamics.org
• [cig-commits] [commit] baagaard/fix-arrayfwd-std: Remove forward declaration of std objects from arrayfwd.hh. (3258d55)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge branch 'baagaard/fix-arrayfwd-std' (fc706d1)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master's head updated: Merge branch 'baagaard/fix-arrayfwd-std' (fc706d1)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Fix compiler error (b33c0df)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next: Merge branch 'baagaard/fix-arrayfwd-std' into next (c5a6655)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next's head updated: Merge branch 'baagaard/fix-arrayfwd-std' into next (c5a6655)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Write 't_c_source' adios variable in the same case than its definition (010149a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Write 't_c_source' adios variable in the same case than its definition (a82e18a)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #314 from mpbl/master (1a49be3)   cig_noreply at geodynamics.org
• [cig-commits] [commit] branch 'baagaard/fix-manual-benchmarks-git' created   cig_noreply at geodynamics.org
• [cig-commits] [commit] baagaard/fix-manual-benchmarks-git: Update benchmark URLs from old CIG subversion repository to CIG GitHub repository. (639bc82)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge branch 'baagaard/fix-manual-benchmarks-git' (a20ffb4)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master's head updated: Merge branch 'baagaard/fix-manual-benchmarks-git' (a20ffb4)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next: Merge branch 'baagaard/fix-manual-benchmarks-git' into next (7763714)   cig_noreply at geodynamics.org
• [cig-commits] [commit] next's head updated: Merge branch 'baagaard/fix-manual-benchmarks-git' into next (7763714)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: fix reading attenuation arrays with multiple runs (8d8a07d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: Buildbot ran the code beautifier. (63ec61d)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Update README_seismic_cpml.html (66475ba)   cig_noreply at geodynamics.org
• [cig-commits] [commit] branch 'baagaard/update-pkgs' created   cig_noreply at geodynamics.org
• [cig-commits] [commit] baagaard/update-pkgs: Updated mpich, openmpi, and cppunit packages. (6021ec8)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Making relaxlite library (7338c32)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Adding the PIC flag needed for relax shared library. (570a8ae)   cig_noreply at geodynamics.org
• [cig-commits] [commit] devel: fixed a typo (62f9975)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Changed a few lines in documentation about reaction term for clarification. (1e6f69f)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Added Rene's replacement text (56388bd)   cig_noreply at geodynamics.org
• [cig-commits] [commit] master: Merge pull request #267 from rrgrove6/temp (06efd8e)   cig_noreply at geodynamics.org

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